Gene Snas_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3412 
Symbol 
ID8884611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3614694 
End bp3615485 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512169 
Protein GI291300891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.37765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0137165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGAAC AGGATGGACG AATCGGGCCC GCGCTCGGGG GCATCACCGA TGTCAAGATC 
AACGACGTTC GCCACGACCT CGTGTTCTAC CAGTCCGGAC TGCTGTTCCT GTCGGACCAC
TCCAAGTCCG ACGCCAAGCG ACTGCGCCGG ATCCTCGACA CCACAACGCA GGCGGAACTC
ATCCGCCGCA ATCGGTTCGT CGATTTCACC GACGTCACCC ACGTCCAGCT CGTCAAGCCC
GGCACCCCGT TCAAGGTCGC GCTCGACCTC CTCGGTGGCG AACAGCTGGA AATCGCCGAA
CGCTGGGTCT CGGCACCGCT CGACAAGAAG GACGGGGACC TTCTCAAGGA ACTGCTGGCC
AACCTGCGCA ACACCGGTCC GATGCCGGAG GCCGCCGCCG CGGAGGCCGC GCGAGCCTGG
GCCGAGGACG CCGTCGTCCT GGACGCGATG GCCAACGTCA AGGTCAACGA CATCGAGTAC
GACCTGGTGG TGCTGGACAT CGGGCTGGTG TTCGTCGCCG GACCCGGTGA GACCCATCTC
GGCAAGACGC GACTGACCAA ACTGCTGGGA GACACCCCGC TGCCCGACAT CGTGGGCCGC
AACTGGCTGG TGCGATACGA GCAGGTGGTC GCGGCGACCA TCACCAAGTC GATCCCGCTC
ACCGGTGAAC TCGAACTCTA CGACGGTTTG CGGCTGTCCT TCAAGGAAAG CTGGATCGGA
CAGTCGCTCA CCGACGAGAC CCGCGAGGTG ACCACGGCCG CCCTGTGCTC GGTGGGCGCC
GTCAAGCCCT GA
 
Protein sequence
MPEQDGRIGP ALGGITDVKI NDVRHDLVFY QSGLLFLSDH SKSDAKRLRR ILDTTTQAEL 
IRRNRFVDFT DVTHVQLVKP GTPFKVALDL LGGEQLEIAE RWVSAPLDKK DGDLLKELLA
NLRNTGPMPE AAAAEAARAW AEDAVVLDAM ANVKVNDIEY DLVVLDIGLV FVAGPGETHL
GKTRLTKLLG DTPLPDIVGR NWLVRYEQVV AATITKSIPL TGELELYDGL RLSFKESWIG
QSLTDETREV TTAALCSVGA VKP