| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3408 |
|---|
| Symbol | |
|---|
| ID | 8884607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 3611480 |
|---|
| End bp | 3612133 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_003512165 |
|---|
| Protein GI | 291300887 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.554507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0106718 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAT CGTCCATAGC ATCGGATCCC GTGAACAGTG GCATCCTCCC CGCGGCCATC
GCCGGATTCG GCACCGGTCT TTCCCTCATC ATCGCCATCG GCGCCCAGAA CGCGTTCGTG
CTGCGCCAAG GCGTGCGCGG CCAGGCCGTG CTCGCCGTGG TCGGCATCTG CGCCGCCTCC
GACGCGGTCC TCATCGCGCT CGGCGTGGCC GGGCTCGGCG CCGTGGTCAC CGCGTGGCCC
ATCGCCCTGA CCGTGGTCGG GTTGGCCGGT GGGATCTTCC TGATCGGTTA CGGCGTCATC
GCCACCCGTC GGGTGCTGCG CCCCGCCGGG CAGGGGCTGA CGGTCGAGGG CGCCTCGGCC
AGCTCGATGC GGATCGCGGT GCTCACCTGC CTGGCGCTGA CCTGGCTCAA CCCGCACGTC
TACCTGGACA CCGTGCTGCT GTTGGGTTCG GTGGCCGCCG ACCGGGGCTC GCTGCGCTGG
GTGTTCGGCC TGGGCGCGAT GGCCGCGAGC CTGGCGTGGT TCGCCGTCCT GGGTTACGGC
GCCCGACTGC TCAGCGCCGT CCTGGCCCGT CCCGCCGCCT GGCGGGCGCT GGACGGGCTG
GTCGCCGTCA CCATGCTCGT GATGGGAACC CTGCTGCTGG TGCGCACGTT CTGA
|
|---|
| Protein sequence | MAGSSIASDP VNSGILPAAI AGFGTGLSLI IAIGAQNAFV LRQGVRGQAV LAVVGICAAS
DAVLIALGVA GLGAVVTAWP IALTVVGLAG GIFLIGYGVI ATRRVLRPAG QGLTVEGASA
SSMRIAVLTC LALTWLNPHV YLDTVLLLGS VAADRGSLRW VFGLGAMAAS LAWFAVLGYG
ARLLSAVLAR PAAWRALDGL VAVTMLVMGT LLLVRTF
|
|---|
| |