Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3398 |
Symbol | |
ID | 8884597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3601181 |
End bp | 3602059 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003512155 |
Protein GI | 291300877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00619315 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.16615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA CCATCCCGGG ATTCGACACC AAAGCGATCG ACGTCGCCGA CGGCGTCAGC CTCAACGCGG CTGTCGGCGG CGACGGCCCC GCGATCATCC TGCTGCACGG CTTCCCGCAG ACCCACCTGA TGTGGCGGCA CGTGGCTCCC GTACTCGCCG AACACCACAC CGTGATCGCG CCCGACCTTC GCGGCTACGG CGCCAGCGCC AAACCCGCCG CACTCGACCC GGACACCTAC TCCAAGCGCA CCATGGCCGC CGACATCGTC GGCCTGGCCG ACGCGCTGGG CATCGACCGG TTCACCCTCG TCGGCCACGA TCGCGGCGCC CACGTCGCCT TCCGCGCGGG ACTGGACCAC CCGAATCGCG TCAGCCAGCT GGGAATCCTC GACATCCTGC CGACTTTGGA CACGTGGAAC GTCCTTCAGG GAGTCAACGC GGCGGTGGCC TTCCATCTGT ACCTGATGGC GCAGCCGGTC GGCCTTCCCG AGCAGATGAT CGCCAACAGC AGCGACGCCT TCTTCGGGTT CTTCCTCGAC GCGTGGAACA CCGGACCCGA CGCGATCCCG GCCGACGTGC GCGCCGAATA CCTGAACGCC AGCCGCCAGG CGGTGGACTC GATCGTCGCC GACGTCCGGG CCACCGCGAC CATCGACATC GAACACGACC AGGCCGATCT CGACGCCGGT AACCGACTGG CCATGCCGGT GACGGTCATC CAGCAGGACT GGGGTCAGCA GCTCGGCTTC GACGCGGCCG CGACCTGGCG GCCCTGGGCC GCCGACCTGG AGCACTTCAC CACCCGGGCG GGCCACTTCA TGGCCGAAAC CGCGCCCGAC GACATCGCGA CGCTGATCCT CAACCTGGCG AAACGGTGA
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Protein sequence | MTITIPGFDT KAIDVADGVS LNAAVGGDGP AIILLHGFPQ THLMWRHVAP VLAEHHTVIA PDLRGYGASA KPAALDPDTY SKRTMAADIV GLADALGIDR FTLVGHDRGA HVAFRAGLDH PNRVSQLGIL DILPTLDTWN VLQGVNAAVA FHLYLMAQPV GLPEQMIANS SDAFFGFFLD AWNTGPDAIP ADVRAEYLNA SRQAVDSIVA DVRATATIDI EHDQADLDAG NRLAMPVTVI QQDWGQQLGF DAAATWRPWA ADLEHFTTRA GHFMAETAPD DIATLILNLA KR
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