Gene Snas_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3390 
Symbol 
ID8884589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3591517 
End bp3592779 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512147 
Protein GI291300869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.365848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCA TCGACAAGGT CCCAGTGGAG ACCCACTTCG ACTGGGAGCA CTTCGCCGGG 
AACTACTGGA ACCAGCGGCC GGTCCTCTAC AGGGCAGTTG CCGAACCGCC CTTCGAGGTC
GGCGAGGTGT TCGCCGCGAC GGCCAACGCG TGCGCGCCGG TATCGAACGG AGCCGTGCCG
TCCGGGGTGC AGTTGACGGT GGAGCGCGAG CAACAGCGCG TCCCCGGCGA TCTGCTGCCT
GCCGCGTCCG ACCGGGACTT CGACGGCTAC CAGGACCGGG TCACCGCCGC GCTGGACGGC
AGGCGGTACG CCCTGACGAT CAACGCGTTC CACAGTCACG AGTGGCGGTT GTGGCACCGG
GAACGCCGGT TCTACCGGCG CCTGTGGGAC CACGTCGGTA TCCCGTCGAC CAGCGCCATC
ACGACGATGT TCCACGGCAC CTACGAGCAC AGTCCCGTCG GAGTCCACAA GGACAGGTTC
GCCACGTTCA TGTTCGGGCT CAAGGGCGAC AAGCGAATGC GGTTCTGGTC CCGCAAACCG
TGGACCGAGG ATGTCAGTTC GGTCGTCGAC TACGCCGAAT ACCTGCCCAG TTCCTTCGTG
GTCGAGGTCG AACCCGGTGA CCTGTTGTAC TGGCCGTCCA CCTACTTCCA CGTCGGGGAG
AGCGGCGGCG CCCCGGCCAC CAGCGTCAAC GTCGGTGTCC CGCACGACGA ACACCGCGCG
GTCTACGACA CGCAGAAGTT CTTCGCCGAC ATCGACCGCG ACGTCTTCAC CGGCGTCACC
CCCGTCAGCG CCGCGATGCC CGCTGTCCCC GTCGATCTGG AGGCGACCGG CCCCGACGCG
GACGGACTGC TGCCCGACGC GGTCCCGGAA CCGTTGCGGT TCGCCGCGGA GGTACTGCGG
CAGTCGCTGG ATGACCAGCG GCTGGACGAA CGGATCGCAC GCGCGTCGCT GACCTGTGTC
AGTGCCGAGG GGCTCGAACC GCCGCCTTCG CCCCGGCCGC GGCGGCCGCT CGCCGACGCC
GATGTGATCC ACGCCGAACC CGAGGTCAAC GTCACCTGGA CCGACCGCGA CGTGCACGGC
CGGATGGTGT CGGTGAACGG GCACACGCTG ACCACCACGA TGGAGCCGTC GCGGCTGCGC
GGTCTGCTGC GCGCGCTTCG GGCCCCGTCC CCGGTGTCGG AGCTGCTGCG AGACCACGAA
TCCGAGGCGC GCAACGTGTT GGAGACGCTG GAGAGCTTCG GCGGTATCCG TCGGGCCGAC
TGA
 
Protein sequence
MKSIDKVPVE THFDWEHFAG NYWNQRPVLY RAVAEPPFEV GEVFAATANA CAPVSNGAVP 
SGVQLTVERE QQRVPGDLLP AASDRDFDGY QDRVTAALDG RRYALTINAF HSHEWRLWHR
ERRFYRRLWD HVGIPSTSAI TTMFHGTYEH SPVGVHKDRF ATFMFGLKGD KRMRFWSRKP
WTEDVSSVVD YAEYLPSSFV VEVEPGDLLY WPSTYFHVGE SGGAPATSVN VGVPHDEHRA
VYDTQKFFAD IDRDVFTGVT PVSAAMPAVP VDLEATGPDA DGLLPDAVPE PLRFAAEVLR
QSLDDQRLDE RIARASLTCV SAEGLEPPPS PRPRRPLADA DVIHAEPEVN VTWTDRDVHG
RMVSVNGHTL TTTMEPSRLR GLLRALRAPS PVSELLRDHE SEARNVLETL ESFGGIRRAD