| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3385 |
|---|
| Symbol | |
|---|
| ID | 8884584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 3583695 |
|---|
| End bp | 3584822 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Epoxide hydrolase domain-containing protein |
|---|
| Protein accession | YP_003512142 |
|---|
| Protein GI | 291300864 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.395947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA TCCGCCCCTT CCGCATCGAG ATTCCGCAGG CCGACCTGGA CGATCTGAAC
GACCGCCTGG CCCGCACCCG TTTCACCAAC GAGCTGCCAC CGGCCCAGGT CGCCTCCCTT
CCCACCGCCG GGCCCATCCA GCCCGGCTGG CAGCACGGCG TCCCGTTGTC CTGGGTTCAG
GACCTGGTGA AACGCTGGCG CGACGACTAC GACTGGCGTG CTTGGGAAAC CAAACTCAAC
TCCCACCCGC ACTTCATCAC CGAGATCGAC GGACAGGACA TCCACTTCGT CCACGTCCGC
TCCGCCAACC CCGACGCCGT CCCGCTGATC CTCACCCACG GCTGGCCCAA CACCTTCGTG
GAGTACTTCG ACCTCATCGA CGCACTGTCA CCGGACTTCC ACCTGGTCAT CCCCGACCTG
CCCGGCTTCG GGTTCTCCGG ACCCACCAAC GACACCGGCT GGAGCGCCAA CCGGGTCGCC
AAGGCCTGGG CCGAACTGAT GAGCCGCCTG GGCTACCAGC GCTACGGCGT ACACGGCAAC
GACGCCGGAG CGATCGTCGC GCCAATACTG GGCATGGTCG ACGCCGCGCA CGTCATCGGC
GTGCACGTCA CCCAGATCTT CTCCTTCCCC AAAGGGGACC CGGGCGAGTT CGACGACCTG
TCCCAGGACG ACATCGAGTA CATGCAGTTC GTGCAGGGGT TCCTGGAGTA CGCCATCCAC
GACCGCACCC AGCAGGCGCA ACCCCAGACG CTCGCCCACG CGCTCGCCGA CTCCCCGGCG
GGCCAGCTGG CCTGGATCGG TCAGTTGCTG GGCCCGCTCG ACCCCGACAT CGTCCTCACC
AACGCCACCA TCTACTGGCT GACCAACACC GCGGCCTCGG CGGCGCGGTT CTACTACGAG
AACCACCACG ACACCGCGCT GGCGAACCAG GAACCGACCA CGACGCCCAT CGGCCTGGCC
GGTTTCGCCT ACGACATGAA GTCGATCCGC AAGTTCGCCG AACGCGACCA CAAGAACATC
GTCGCGTGGT CCCAGTTCGA CCGCGGCAGC CACTGGGCCG CCCACGACGC GGGCGACCTG
CTGGCGGGCG ACATCAGGAA GTTCTTCACC GAACACGTCG AAGTCTGA
|
|---|
| Protein sequence | MTQIRPFRIE IPQADLDDLN DRLARTRFTN ELPPAQVASL PTAGPIQPGW QHGVPLSWVQ
DLVKRWRDDY DWRAWETKLN SHPHFITEID GQDIHFVHVR SANPDAVPLI LTHGWPNTFV
EYFDLIDALS PDFHLVIPDL PGFGFSGPTN DTGWSANRVA KAWAELMSRL GYQRYGVHGN
DAGAIVAPIL GMVDAAHVIG VHVTQIFSFP KGDPGEFDDL SQDDIEYMQF VQGFLEYAIH
DRTQQAQPQT LAHALADSPA GQLAWIGQLL GPLDPDIVLT NATIYWLTNT AASAARFYYE
NHHDTALANQ EPTTTPIGLA GFAYDMKSIR KFAERDHKNI VAWSQFDRGS HWAAHDAGDL
LAGDIRKFFT EHVEV
|
|---|
| |