Gene Snas_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3381 
Symbol 
ID8884580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3578821 
End bp3580176 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512138 
Protein GI291300860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.415782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAC CCCCGTCACC CGGGCCCGAA CCGTGGCAGT CGCCACCTGT GCCACCGCCG 
TATGCTGCGC AACCGCAGCT CCCGGCCCCG GGATACACGC CACCGCCGGA GGCGGTGCCC
GCTGAGCCAC CCGCCCTGGA CGGCGCGGTG TGGTGGCGCC GGGGGCTGGC CTGGTTCGTC
GACATCATGT TGATCCGCAT CGTGGCCGCC GGACTGGGCT ACCTGACGTA CCGGCGGATC
GTCAGCCCGT TCTCGGGCGT GGGTTCGTCG GCGCACTCGG CGCTGAAGAA CCTGTTCAGC
TCCGGCGGCG ACATCGCGAA GGTGGCCACC AAGACCGGCG CCGACGTGTG GGGCATAGTG
TCGTCGCTGA TCATCCAGGG CTTCGCGCTG CTCGTCGTGA TCCACTTCCT GTACCTGTTC
ATCGCGCTGG CCTGGACCGG ACGCACTGTG GGCAAGATGC TGTTGGACGT GCGGGTCGTG
CCCGAAGCGT CCGACACCGT GAAGGCCAAG CCTGGCAAGG GGCGCGCCGC CCGGCGGGCG
GCGGTCTCGG CGATGGCCGA CACGGGGTTG TTCTCGCTGG CGTGCTGCCT GCTGTTGTTG
GGGCAGTTCA CGTTGAGCGT GCTGTGCTGG ATGGTGTCCG TGATGTTCTT CCTCGCCAAC
GGACTGCCGG TGCTGTGGGG TCGGCACCGC AGCCTGGCCG ACATGGCGGC GGGGACGACG
GCACCGCAGG GCCAGCTGTA TGAAGTCATG GCCCGCGGCG CCGTCCGGGG TGGACAGTTC
GCGGCAACCC ACCTCGCCAG GGGCGGCCGC GCGGTCGCCG AGCGCTCCCG CAACCTCGCC
GAACTCGAAC ACGTCCAGAA AGTGCTGAGT TCCGAACGCG CCCAACAGCT ACGGCAGGCG
AGCAAGGGCG TCACCGACAA GGGGCGGCAG GCCTTGAAGC GGATCAAGCG ACGCGGCGAG
GAACCCGAAG CGCTCCCCGG CGTCGTCCCG CCACCGACGA CGGGGATGTA CCCGGCCACG
GGCTACCCGC CGGGCGCCCC ACACGGATAC GCCACACCGC AGCCGGGCCA AGTGGTCCCG
CCCTTGGGCC AGCCGGTTGT GCCGCCCGCG CCGCAGTTGA GCCAGCCGAA TATGCCGCCC
GCGCCGCAGC CGGGCCAAGT GGTCCCGCCC CTAGGCCAGC CAGCCCCGCC ACCCGTACCG
CAACTGGGTC AGCCGCTCCC GCCGCCCGCC CCGCCGGTGC CGCCCGTCCC GGGCGATCCG
GCGCAGCCGC AGGGCTTCAC GCCCTCGCCG TACGCCGCCG AGGACTATCG CGCCGCCGCG
CCCGAGGACC CCGAGCCGCC GCAGCCCGCC CGCTGA
 
Protein sequence
MYQPPSPGPE PWQSPPVPPP YAAQPQLPAP GYTPPPEAVP AEPPALDGAV WWRRGLAWFV 
DIMLIRIVAA GLGYLTYRRI VSPFSGVGSS AHSALKNLFS SGGDIAKVAT KTGADVWGIV
SSLIIQGFAL LVVIHFLYLF IALAWTGRTV GKMLLDVRVV PEASDTVKAK PGKGRAARRA
AVSAMADTGL FSLACCLLLL GQFTLSVLCW MVSVMFFLAN GLPVLWGRHR SLADMAAGTT
APQGQLYEVM ARGAVRGGQF AATHLARGGR AVAERSRNLA ELEHVQKVLS SERAQQLRQA
SKGVTDKGRQ ALKRIKRRGE EPEALPGVVP PPTTGMYPAT GYPPGAPHGY ATPQPGQVVP
PLGQPVVPPA PQLSQPNMPP APQPGQVVPP LGQPAPPPVP QLGQPLPPPA PPVPPVPGDP
AQPQGFTPSP YAAEDYRAAA PEDPEPPQPA R