Gene Snas_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3378 
Symbol 
ID8884577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3575053 
End bp3576630 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content67% 
IMG OID 
ProductCarboxylesterase 
Protein accessionYP_003512135 
Protein GI291300857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.57709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCACA AACGTCCCGC CGCAGTGATC GCGGCGCTCC TCCTCGCGCT GGGGTTGGTC 
GCCTGCGCCG AACCGGCCGC GTCCGCCCCC TCCACAAGGG TTGAAACCGC CGACGGGCCG
GTGCGCGGTG ACGATCGCGG CGGGTACCGG ACCTTCGAGG GCATCCCGTT CGCGGCTGCG
CCGGTGGGTG ACCTGCGCTG GCAGCCGCCG CAACCGGTCA AGCCATGGAA GGACGTCCGA
AAGGCCACCG AGCCGGAGTC GCTGTGCGTA CAGGCGCCCG ACGACCCCGT GCCCGGCAAG
CAGTCCGAGG ACTGCCTGTA CCTGAACGTG ACCACACCGG ACACCGCCAC CCCCGACAAA
CCCAAGCCGG TCATGGTGTG GCTGTACGGC GGCGGCTTCT ATCAGGGCAA CGCCGCCGAG
TACGACGCCC GGCGACTGGC CACCGAAGGG GACGTCGTCG TGGTCACGCC CAACTACCGG
CTGGGTGTCT TCGGGTACTT CGACCATCCC GAACTCGACG ACGGTGGGGC TTATGGGCTC
GCCGATCAAC AAGCGGCGCT GCGCTGGGTG CGCGACAACG CCGCCGCCTT CGGCGGCGAT
GCCGACAACG TGACGCTGTT CGGCGAGTCC GCCGGTGCGA TGAGCGTGTG CGCCCAGTTG
ACCGCGCCGG ACTCGGCGAA GCTGTTCCAC AAGGCCATCA TGCAAAGTGG AAACTGCCTG
ATCGAGTGGC CGTCGTTCAC TGAGGACTCC CGAGGCCAGT CACCGTTCGA ATCGGCCAAG
GACAACCGGG CACTGGGAAG CGAGACCGCC GCCGAGGCGA ACTGCGACAA GAAGAAGGAC
CCGATCGCCT GCCTGCGTGA GCAACCAGCG GACGAGCTCA CCGACAGGAT GCGGGATTTC
ACGCCCGGGT ACGGCAACTC GGTCCTGCCG CGCCATCCGG CCATCGCGTT GCGCGACGGC
GACTTCAACC AGGTGCCGAT CATCATCGGC AACACCCGGG ACGAGGCCCG CACCTCCATC
ACGGGAGCGG TCGAGTCACC GCTGTCGAAG GCGGCCTACA CCGAGGCGCT CACCGAGGAC
TTCGGCGAGA GGGCCGAAGC GGTGGCCCGG GAGTATCCGC CCGGTTCCGA CGACAACGGG
CTGACCTACG CCAAGGTGAA CACCGACCGC ACCTGGGCGT ACTCCACGCA CCGCACCCGC
CAGATCCTCG CCGAGACGGT GCCGACGTTC GCGTTCGAGT TCGCCGACCG CGAGGCTCCG
TACTATCCCG GCATGGTCGA GACCGGTTAC CGGTACGGCG CCTTCCACGG CTCCGAAGTT
CCCTACCTGT TCGACATCCA CGGTGTCGAC ATGGAACTGT CACGGCCGCA GGCGAAGCTG
GGCGAACGGA TGATCGCCTA CTGGACCCGG TTCGCCGCCA CCGGCGACCC CAACGGCGGA
AACTCACCAC AGTGGAGCCA CTTCGAGTCC GGCTCGCGGC ACGTGCAGTC ACTGGCCCCG
GGCAAGGACG GCATCGCAGC GGCCGACTTC GAAACCGACC ACCACATCGA GTTCTGGACC
GAGCACCTGA ATGACTAG
 
Protein sequence
MSHKRPAAVI AALLLALGLV ACAEPAASAP STRVETADGP VRGDDRGGYR TFEGIPFAAA 
PVGDLRWQPP QPVKPWKDVR KATEPESLCV QAPDDPVPGK QSEDCLYLNV TTPDTATPDK
PKPVMVWLYG GGFYQGNAAE YDARRLATEG DVVVVTPNYR LGVFGYFDHP ELDDGGAYGL
ADQQAALRWV RDNAAAFGGD ADNVTLFGES AGAMSVCAQL TAPDSAKLFH KAIMQSGNCL
IEWPSFTEDS RGQSPFESAK DNRALGSETA AEANCDKKKD PIACLREQPA DELTDRMRDF
TPGYGNSVLP RHPAIALRDG DFNQVPIIIG NTRDEARTSI TGAVESPLSK AAYTEALTED
FGERAEAVAR EYPPGSDDNG LTYAKVNTDR TWAYSTHRTR QILAETVPTF AFEFADREAP
YYPGMVETGY RYGAFHGSEV PYLFDIHGVD MELSRPQAKL GERMIAYWTR FAATGDPNGG
NSPQWSHFES GSRHVQSLAP GKDGIAAADF ETDHHIEFWT EHLND