Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3378 |
Symbol | |
ID | 8884577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3575053 |
End bp | 3576630 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Carboxylesterase |
Protein accession | YP_003512135 |
Protein GI | 291300857 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.57709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCACA AACGTCCCGC CGCAGTGATC GCGGCGCTCC TCCTCGCGCT GGGGTTGGTC GCCTGCGCCG AACCGGCCGC GTCCGCCCCC TCCACAAGGG TTGAAACCGC CGACGGGCCG GTGCGCGGTG ACGATCGCGG CGGGTACCGG ACCTTCGAGG GCATCCCGTT CGCGGCTGCG CCGGTGGGTG ACCTGCGCTG GCAGCCGCCG CAACCGGTCA AGCCATGGAA GGACGTCCGA AAGGCCACCG AGCCGGAGTC GCTGTGCGTA CAGGCGCCCG ACGACCCCGT GCCCGGCAAG CAGTCCGAGG ACTGCCTGTA CCTGAACGTG ACCACACCGG ACACCGCCAC CCCCGACAAA CCCAAGCCGG TCATGGTGTG GCTGTACGGC GGCGGCTTCT ATCAGGGCAA CGCCGCCGAG TACGACGCCC GGCGACTGGC CACCGAAGGG GACGTCGTCG TGGTCACGCC CAACTACCGG CTGGGTGTCT TCGGGTACTT CGACCATCCC GAACTCGACG ACGGTGGGGC TTATGGGCTC GCCGATCAAC AAGCGGCGCT GCGCTGGGTG CGCGACAACG CCGCCGCCTT CGGCGGCGAT GCCGACAACG TGACGCTGTT CGGCGAGTCC GCCGGTGCGA TGAGCGTGTG CGCCCAGTTG ACCGCGCCGG ACTCGGCGAA GCTGTTCCAC AAGGCCATCA TGCAAAGTGG AAACTGCCTG ATCGAGTGGC CGTCGTTCAC TGAGGACTCC CGAGGCCAGT CACCGTTCGA ATCGGCCAAG GACAACCGGG CACTGGGAAG CGAGACCGCC GCCGAGGCGA ACTGCGACAA GAAGAAGGAC CCGATCGCCT GCCTGCGTGA GCAACCAGCG GACGAGCTCA CCGACAGGAT GCGGGATTTC ACGCCCGGGT ACGGCAACTC GGTCCTGCCG CGCCATCCGG CCATCGCGTT GCGCGACGGC GACTTCAACC AGGTGCCGAT CATCATCGGC AACACCCGGG ACGAGGCCCG CACCTCCATC ACGGGAGCGG TCGAGTCACC GCTGTCGAAG GCGGCCTACA CCGAGGCGCT CACCGAGGAC TTCGGCGAGA GGGCCGAAGC GGTGGCCCGG GAGTATCCGC CCGGTTCCGA CGACAACGGG CTGACCTACG CCAAGGTGAA CACCGACCGC ACCTGGGCGT ACTCCACGCA CCGCACCCGC CAGATCCTCG CCGAGACGGT GCCGACGTTC GCGTTCGAGT TCGCCGACCG CGAGGCTCCG TACTATCCCG GCATGGTCGA GACCGGTTAC CGGTACGGCG CCTTCCACGG CTCCGAAGTT CCCTACCTGT TCGACATCCA CGGTGTCGAC ATGGAACTGT CACGGCCGCA GGCGAAGCTG GGCGAACGGA TGATCGCCTA CTGGACCCGG TTCGCCGCCA CCGGCGACCC CAACGGCGGA AACTCACCAC AGTGGAGCCA CTTCGAGTCC GGCTCGCGGC ACGTGCAGTC ACTGGCCCCG GGCAAGGACG GCATCGCAGC GGCCGACTTC GAAACCGACC ACCACATCGA GTTCTGGACC GAGCACCTGA ATGACTAG
|
Protein sequence | MSHKRPAAVI AALLLALGLV ACAEPAASAP STRVETADGP VRGDDRGGYR TFEGIPFAAA PVGDLRWQPP QPVKPWKDVR KATEPESLCV QAPDDPVPGK QSEDCLYLNV TTPDTATPDK PKPVMVWLYG GGFYQGNAAE YDARRLATEG DVVVVTPNYR LGVFGYFDHP ELDDGGAYGL ADQQAALRWV RDNAAAFGGD ADNVTLFGES AGAMSVCAQL TAPDSAKLFH KAIMQSGNCL IEWPSFTEDS RGQSPFESAK DNRALGSETA AEANCDKKKD PIACLREQPA DELTDRMRDF TPGYGNSVLP RHPAIALRDG DFNQVPIIIG NTRDEARTSI TGAVESPLSK AAYTEALTED FGERAEAVAR EYPPGSDDNG LTYAKVNTDR TWAYSTHRTR QILAETVPTF AFEFADREAP YYPGMVETGY RYGAFHGSEV PYLFDIHGVD MELSRPQAKL GERMIAYWTR FAATGDPNGG NSPQWSHFES GSRHVQSLAP GKDGIAAADF ETDHHIEFWT EHLND
|
| |