Gene Snas_3363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3363 
Symbol 
ID8884562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3563337 
End bp3563936 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003512121 
Protein GI291300843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGGCG GCGAGAAGGA CGGGCCGACG GTGGTGAGCC GCACCGGCCC CAAACGCAGC 
GACAGCGCCC GGCTCGCCGT GCTGCACGCG GCCGACGATC TCCTGGCCGA GAAGGGCTTC
AGCGGCGTGA CGATCGAAGG CATCGCCACC CGAGCCGGAG TCGCCAAACA GACGGTCTAC
CGATGGTGGA AATCCAAAGT CGACATTCTC ATCGACACCC TCGTCGACGA CGCCGACACC
AACCTGGCCT GGCCGCCCGA AGACGAGGAC CCACCCGTCG TCCGGCTGCG CCACCACCTG
GGTCGGGTCA ACGCCTTCCT CACCCAGCCC GCCGGACAGG TACTGCGGGC CCTGCTGGGA
CACGCCCAGC TCGACCCGGC CGCCGCCGCC CACTTCGCCC AACGATTCGG CGACCCCCAA
CGCGAACGCG ACCAAGCGGG CATGGCGACG ATCCTCGACC TCCCGCGAAC ACATCCGAAG
GTCGCCTTCG CCGTCAGCGT GGCGCTGGGC CCGTTGTACC ACCGACTGCT CACCGGACAA
GCCCCACTCG ACGAGTCCGA ACTCGACGAA CTCACGACAA TGGTGCTGGG CATGTATTGA
 
Protein sequence
MSGGEKDGPT VVSRTGPKRS DSARLAVLHA ADDLLAEKGF SGVTIEGIAT RAGVAKQTVY 
RWWKSKVDIL IDTLVDDADT NLAWPPEDED PPVVRLRHHL GRVNAFLTQP AGQVLRALLG
HAQLDPAAAA HFAQRFGDPQ RERDQAGMAT ILDLPRTHPK VAFAVSVALG PLYHRLLTGQ
APLDESELDE LTTMVLGMY