Gene Snas_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3355 
Symbol 
ID8884554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3556133 
End bp3557362 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003512113 
Protein GI291300835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.141056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACAG GACTGACCAC CCGACGACGC GTACTGCTGG CCATCGTGTG CGCCGTGGCG 
GTGTCCACCA TCTACGGCAT CCAACCGGTC CTCGAAGCCG CGGGCCGCGA CCTGGGAATG
AACCCGGCCG CCCTGGGATG GCTGGTGGCC TCCGGGCAGA TCGGCTACCT CGCCGGACTC
GTGCTGCTGG TACCCCTCGG CGACCTGCTC AACCGCCGCA GGCTCATCAC CACCCACCTC
GTCCTCATCG CGCTGGGCGC GGCCATCACC GCGATCGCCC CCACCGCCGC CATCGCGATC
GCGGGCCTGG CCCTGGCCGG GCTGTTCGCC GTCGTCGTCC AGACCACGGT GGCCTACGTC
GCCGCCGTCT CCCCGCCCCG TCAACGCGGA CGCGACATCG GGGCGGTCAC CTCCGGCGTC
GTTATCGGCA TCCTCGGCGT ACGCGTCGCC GCGGGCAGCC TCGCCGACCT CGCCGACTGG
CGGGCCGTCT ACCTCGTCCT CACCGGACTG TCCGTACTCC TCGCATTCGC CACCGCGACC
ATCCTCGACG CCGACCACCC CCGCCCCCAA ACCCGCTACC CGCGACTGCT GGCATCCCTG
GCGCACCTGG CCGCCACCGA CCGGCTGCTG CGCAACCGCG GCCTGGTCGC GTTCTTCCTG
TTCGCCTCGT TCGGAACACT GTGGAGCGGC CTGGCGCTGC CCCTGACCGA AGCACCCTGG
CACCTAACGA CAAGCCACAT CGGACTATTC GGGCTCGCCG GTCTCACCGG AGCCCTCGGA
GCCGCCCGCG CCGGCCGCTG GGCCGACCGG GGCCTGACCA CCAGGGTCAC CATCTGGTCG
TTGGGACTGC TCATCGCCTC CTGGCTGCTC ATCGCCCAGA CGGGATCGTC ACTGTGGCCG
CTGATCGTCG GCATCATCGC CCTGGACTTC GCCGTACAAG CCGTCCACGT CAGCAACCAA
CACCTGCTCA CCACCGCCCA CCCCGAGCGA AGCAGCACCG TCATCGGCGC CTACATGGCC
TTCTACTCAC TGGGCTCCGC GCTGGGAGCC ATCACCACGA CCTGGGCATA CAGCCTCGCG
GGATGGCCAG CCGCCAGCCT GCTCGGCGCC GCCTACGCCG CGCTGGCGCT TCTCGTCGCC
GCCGCACTCC ACCAAACCCC GACCCGCCCC CATGCGAAGC CCGCCGACGG TAACCACACT
CGCGCCGAAA CCGCCCGATG CTCGGAGTAA
 
Protein sequence
MTTGLTTRRR VLLAIVCAVA VSTIYGIQPV LEAAGRDLGM NPAALGWLVA SGQIGYLAGL 
VLLVPLGDLL NRRRLITTHL VLIALGAAIT AIAPTAAIAI AGLALAGLFA VVVQTTVAYV
AAVSPPRQRG RDIGAVTSGV VIGILGVRVA AGSLADLADW RAVYLVLTGL SVLLAFATAT
ILDADHPRPQ TRYPRLLASL AHLAATDRLL RNRGLVAFFL FASFGTLWSG LALPLTEAPW
HLTTSHIGLF GLAGLTGALG AARAGRWADR GLTTRVTIWS LGLLIASWLL IAQTGSSLWP
LIVGIIALDF AVQAVHVSNQ HLLTTAHPER SSTVIGAYMA FYSLGSALGA ITTTWAYSLA
GWPAASLLGA AYAALALLVA AALHQTPTRP HAKPADGNHT RAETARCSE