| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3338 |
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| Symbol | |
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| ID | 8884537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3536416 |
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| End bp | 3539175 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003512097 |
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| Protein GI | 291300819 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.682048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACAC TGAAGCGGCA CGGAAAAACC ACGGATGCCG GGCATAATGG CGCGGTGACC
GCGCCCCGAA TCCCGCACCT GTCCAACCGT GAGACGGAGG TGCTCGCCGC GCTGGGCGCG
AAGCTGTCGA ACGCGCAGAT CGCGCACCGG TTGCGGATCT CGGTGCGCAC GGTGGAAAGC
CACGTCTCGT CGCTGCTGCG CAAGTTCGGG GTCACCGATC GCTGGGCGCT GACCGAACTG
TCGCAGCCGG GCTCGCCGAC ACCGGCGCTG CTGGCGGGGC TGCCCACCGC GCGCACCAGC
TTCGTCGGCC GGGCCCCGGA ACGCGAGCAG GTACTGGCCT CGCTGTCCGA AGCGCGCTTG
GTGACGCTGC TGGGGCCGGG CGGCGTGGGC AAGACCCGAC TCGCGGCCGA GGTGAGCGCG
GCGGCGGCAC CGGACTTCCC GCAGGGCGGG GCGTTCGTCG ACCTGGTGCC GGTGCGGGAC
GGGTTCGTCG CGCAGGCGGT GGCGACCGCG CTGGGCGTCG TCTCCCGGCC GGGACAGTCG
CTTGAGGACG CGATCTGTCA GCACCTGCGC CGGGGCCGGG GACTGCTCGT CCTCGACAAC
TGCGAGCACC TGATGGACTC GGCCGCCGGG TTCGCCGAGC GGGTGCTGTC CAGCTGCCCG
GACACCACGG TGCTCACCAC GAGCCGGGAA CGACTGCGCC TGGCCGGTGA GCGCGCCATC
CCGGTACCGG CGCTGCGACT GGAATCCGAA GCCCAGCAAC TGTTCCACGA CCGAGCGCTG
GCCGCCGACC CCGGCTTCGC CGCCGATCCG ACCGTGGTGG CCGAGATCTG CGCCCGGCTG
GACGGCCTGC CGCTGGCGAT CGAACTGGCC GCGGCCCGCA GCGTTTCGCT GGGCGCGGCC
GGGCTGCTGG ACGCGCTGGA CGACGCGCTG CGGTTGCTGG ACGGCGGCCG CGATCCCGAC
GAACGCCACC GGTCGCTGCG CGCGGTGATC AGCTGGAGCT TCCACCTGCT GGACGATGAC
GAACGCGCGT TGCTGTGCCG ACTGGCGGTC TTCGTCGGTG GCTTCGACCT GGACGCGGCT
GTGGCCGTCG CGACCGGGAC TCGCGGCGCG GTCGCCGATG TGCTGGGGCG TTTGGTGGAG
AAGAGCCTGG TCGAGCACCG GTCGGGTCGA TGGCGGCTGC TGTCGACGAT TCGCGGCTAT
GCCGTCGGGA AACTCGCCGA CAGCGGCGAT GAACCCGAGG TGCGAGAACG CCACCTGCGG
TGGGCGGCGG AGCTGGCCGC CGATCTGGTG ACCCGGTTGG ACGGGGAATG GCGGGACGAG
TTCGACGCGG TCGCCGACGA CCTACGCGCC GCGGTGGCCG CCGCGGCTGA GACGCCTTCC
GAAGTGCCGC ACCGACTCGC GCGGTCGCTG GGTTGGCTGA CCTACGCGCG TCGGTTCCTA
CCCGAGACGC CGGATCATTT CTGCGCGGCG GCGCGCTTCG CCGAGGACCC AGGGGAAGCG
GCCGAGGATC TACGCAACGC CGCCGACGCC GCGCACGCGT ATATCGACAC TGGACGGTCG
TACGATCTGC TGCTGGCGTC GGCGGAGAAG GCCCGCGCCG CTGGTGATCC GCGTGCCGAG
GCGATCGCGT TGGCGTTCGC CGTGGTCACC GCCAACCGGC ACCCGGGCGG CTTCAGTACC
GAGATCTCCG GCGAGAGCCT GCGGGAGCTG CTCGACCGGG CCAAGACCGT CGGTGATCGC
GCCGATCCCC TGGTGGCCGC GCACCTGGCG GCGGCCGAGG CATGGAGCGC CCGGGACGAG
AAGGTCTTGC CCGATCCGGA ACTGCTCGAC GAGGCGATCG AAACCGCTAC GGCCACAGGC
GATCCGGTGC TGATCAGTGC GGCACTGGAC GCGGCGTGCA TCGCCGCGCT GACCACGGGG
CGGTTTCGGG AAGCGCATCG CATCGGTTCG CGCCGGGTCG CCTTGCTGTC CGAGATGCCG
CGCAACGACC CCTACAGCGC GCCGGAGATC ACCGACACCT ATCACATGGC ATCGGGTTGC
GCGGTCGCCG CCGGGGACCT GCCCGCCGCG TTGAAGGCGG CCCGGTCGGC GCTCGCGGAC
GATCTGATCG GCCGTCAGTC CTATGTCGCG TTTCAGGCGT CGATTCCGCC GCTGGTGCTC
AGCGGTGACC TGAGCGGTGC GCTTCAACAG GCGCCGGTGT TGTGGGACGC GTGCGTGCGC
GCGGCGAGTC CGCTGGCGTG GATGTCACCG GCGGTGGCCG CGATCGCGTT GGCGCACGGG
CTGTTGGGGG ACGCGGAGCA GTACCGGCTG TGGCGGGAGC GGGCGGAACA GGTGGCGCGG
CCGGTGTCGC TGCGGTATCT GGCTTCGTTC GCGGCATTCG TCGACGCTCG GGTCGCGGTG
CACACCGATG CGCTCGGCGA CGCCGCCGAG ATGGTGGAGC GGGCGTTCGC GGAGTCTCCG
CCGCAGGACT GGTATCGGCC GTACGCTCGG GCGGCGGGGG CGGAGCTGGC GATCGTCGCA
GGGCTGCCGG ACGCGGCGCA GCGACTGGCC CAGGCACGTC ATGCGGCCGT CGAGAACGAC
TGGGCCACAG CATGTCTGGA CCGTTGCGCG GGGCGGTGGC ACGCCGACGA GGTCGCGCTC
CACAAAGCCG TGCGAGGGTG GGAGCGGATC GGGGCGCGCT TCGAGAGGGC CACCACGTTG
CTGCTGTTGC CCGACAAGGT CGACGAAGGA CGCCGCGAGC TGGCACTGAT GTCCGAATAG
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| Protein sequence | MPTLKRHGKT TDAGHNGAVT APRIPHLSNR ETEVLAALGA KLSNAQIAHR LRISVRTVES
HVSSLLRKFG VTDRWALTEL SQPGSPTPAL LAGLPTARTS FVGRAPEREQ VLASLSEARL
VTLLGPGGVG KTRLAAEVSA AAAPDFPQGG AFVDLVPVRD GFVAQAVATA LGVVSRPGQS
LEDAICQHLR RGRGLLVLDN CEHLMDSAAG FAERVLSSCP DTTVLTTSRE RLRLAGERAI
PVPALRLESE AQQLFHDRAL AADPGFAADP TVVAEICARL DGLPLAIELA AARSVSLGAA
GLLDALDDAL RLLDGGRDPD ERHRSLRAVI SWSFHLLDDD ERALLCRLAV FVGGFDLDAA
VAVATGTRGA VADVLGRLVE KSLVEHRSGR WRLLSTIRGY AVGKLADSGD EPEVRERHLR
WAAELAADLV TRLDGEWRDE FDAVADDLRA AVAAAAETPS EVPHRLARSL GWLTYARRFL
PETPDHFCAA ARFAEDPGEA AEDLRNAADA AHAYIDTGRS YDLLLASAEK ARAAGDPRAE
AIALAFAVVT ANRHPGGFST EISGESLREL LDRAKTVGDR ADPLVAAHLA AAEAWSARDE
KVLPDPELLD EAIETATATG DPVLISAALD AACIAALTTG RFREAHRIGS RRVALLSEMP
RNDPYSAPEI TDTYHMASGC AVAAGDLPAA LKAARSALAD DLIGRQSYVA FQASIPPLVL
SGDLSGALQQ APVLWDACVR AASPLAWMSP AVAAIALAHG LLGDAEQYRL WRERAEQVAR
PVSLRYLASF AAFVDARVAV HTDALGDAAE MVERAFAESP PQDWYRPYAR AAGAELAIVA
GLPDAAQRLA QARHAAVEND WATACLDRCA GRWHADEVAL HKAVRGWERI GARFERATTL
LLLPDKVDEG RRELALMSE
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