Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3336 |
Symbol | |
ID | 8884535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3533266 |
End bp | 3534042 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Alginate lyase 2 |
Protein accession | YP_003512095 |
Protein GI | 291300817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.906115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGCT TCAACCGCAC GACAACCGTC GTGCTCGGTT CGGCAACCCT GGTCGGTGCG CTGGCCATCG CGATACCGGC CACCAGTGCG CTGGCCGAGG ACGACTGCAC CTACCCGGCA CAGGTGCTGG ACCTGAAGAG CTGGAAGGTG ACGCTGCCGG TGGGGGAGGA CGAGGAGCCC ACCGAGATCA AGCAGCCCGA GCTGGCGGAG TTCGAGATGG ATCCGTGGTT CACGCCGCTG GAAGACTGCT CGGGGGTCCA GTTCCGGTCG GCCGTGGACG GGGTGACCAC CGGTGGGTCG AAGTACCCGC GTTCGGAGCT GCGGGAGATG AACGAGGACG GCTCGGACGA GACGGAGTGG TCGGGTGAGT CGGGGACCCA CACGATGGTC ATCGACGAGG CGATCACCCA GGTGCCCAAC GACAAGCCCG ACGTCGTGGC CGGGCAGATC CACGGCGGTG ACGACGACGT GTCGGTGTTC CGCCTGGAGG GCACCAAGTT GTACGTCACC GACGGCGACA CCAGTGACCA TCACCTGATC ACCGACGACT ACGAGCTGGG CACCCGCTTC GAGGCGAAGT TCGTCGTCAG CGACGGCGAG ATCAAGGCGT ACTACAACGG GGAACTGCAG ACCACGCTGC CCGCCGACTT CGACGCCGGG TACTTCAAGG CCGGTGCCTA CACGCAGGCC AACTGCGACA GCCCCTCGGA TCCGTGCGAC GAGACCAACT ACGGCGAGGT CCACATCTAC GACATCCAGG TCACCCACGA GGACTGA
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Protein sequence | MRRFNRTTTV VLGSATLVGA LAIAIPATSA LAEDDCTYPA QVLDLKSWKV TLPVGEDEEP TEIKQPELAE FEMDPWFTPL EDCSGVQFRS AVDGVTTGGS KYPRSELREM NEDGSDETEW SGESGTHTMV IDEAITQVPN DKPDVVAGQI HGGDDDVSVF RLEGTKLYVT DGDTSDHHLI TDDYELGTRF EAKFVVSDGE IKAYYNGELQ TTLPADFDAG YFKAGAYTQA NCDSPSDPCD ETNYGEVHIY DIQVTHED
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