Gene Snas_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3336 
Symbol 
ID8884535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3533266 
End bp3534042 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID 
ProductAlginate lyase 2 
Protein accessionYP_003512095 
Protein GI291300817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.906115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCT TCAACCGCAC GACAACCGTC GTGCTCGGTT CGGCAACCCT GGTCGGTGCG 
CTGGCCATCG CGATACCGGC CACCAGTGCG CTGGCCGAGG ACGACTGCAC CTACCCGGCA
CAGGTGCTGG ACCTGAAGAG CTGGAAGGTG ACGCTGCCGG TGGGGGAGGA CGAGGAGCCC
ACCGAGATCA AGCAGCCCGA GCTGGCGGAG TTCGAGATGG ATCCGTGGTT CACGCCGCTG
GAAGACTGCT CGGGGGTCCA GTTCCGGTCG GCCGTGGACG GGGTGACCAC CGGTGGGTCG
AAGTACCCGC GTTCGGAGCT GCGGGAGATG AACGAGGACG GCTCGGACGA GACGGAGTGG
TCGGGTGAGT CGGGGACCCA CACGATGGTC ATCGACGAGG CGATCACCCA GGTGCCCAAC
GACAAGCCCG ACGTCGTGGC CGGGCAGATC CACGGCGGTG ACGACGACGT GTCGGTGTTC
CGCCTGGAGG GCACCAAGTT GTACGTCACC GACGGCGACA CCAGTGACCA TCACCTGATC
ACCGACGACT ACGAGCTGGG CACCCGCTTC GAGGCGAAGT TCGTCGTCAG CGACGGCGAG
ATCAAGGCGT ACTACAACGG GGAACTGCAG ACCACGCTGC CCGCCGACTT CGACGCCGGG
TACTTCAAGG CCGGTGCCTA CACGCAGGCC AACTGCGACA GCCCCTCGGA TCCGTGCGAC
GAGACCAACT ACGGCGAGGT CCACATCTAC GACATCCAGG TCACCCACGA GGACTGA
 
Protein sequence
MRRFNRTTTV VLGSATLVGA LAIAIPATSA LAEDDCTYPA QVLDLKSWKV TLPVGEDEEP 
TEIKQPELAE FEMDPWFTPL EDCSGVQFRS AVDGVTTGGS KYPRSELREM NEDGSDETEW
SGESGTHTMV IDEAITQVPN DKPDVVAGQI HGGDDDVSVF RLEGTKLYVT DGDTSDHHLI
TDDYELGTRF EAKFVVSDGE IKAYYNGELQ TTLPADFDAG YFKAGAYTQA NCDSPSDPCD
ETNYGEVHIY DIQVTHED