Gene Snas_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3335 
Symbol 
ID8884534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3531916 
End bp3533253 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512094 
Protein GI291300816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC GAATCGTGAC CGCCTTGATC GGCGTGACCC TGGCGCTGAC CGTTGCCGGG 
GTGACGGTGG CCGCTTCGGC CGACGACGCG GAGACCGCGG ACCGTCCGAA GTACGGCACC
GATGGCAACG GCAATCCCGA GACCGGCGAT TGCACCGTCA GCACCGACGA GGACCCGCAG
TCGGCCGTCG ACGACGCCGC GGATGGCGAT GTCGTGTGCG TCAAACCCGG CGACCACTCG
GACTCCACGT TGAACGTCGA CAATGCGGTC ACGGTTCGCG CCAACGGGAT CGTGAAACTG
CGGAACATCG TCGTGTCCGG CGACGGCGCG ACGATCGACG GTTTCACCGT CGTCGGTGAC
GAACTGGACG ACCCGTCCAC GGGCATCAAG TTCTCCGGAA CCGGCCACGA GATCGTCAAC
AACCTCGTCA ACGGCAAACA CATCCACTAC GCGATCGCCT GCGACGCCGA CGAATGCGCC
AGTGACGTCC TGATCTCCCG CAACTCGGTC ACCCAGACCA ACAACTTCGG CGTCTACCTG
TGGGGCGGCT CCGACATCAC CGTCGAGTGG AACAACATCT ACGACCTGTG GTCCGACGAG
GGCAACGACG ACGTCGACGG CATGCGGATC TGGGGCACCG GCCACCTGAT CCGCAACAAC
TACATCCACG ACCTGAACGT CAACAAGGGG GAGGGTGAAC CGCACGCCGA CTGCATCCAG
AACTACCAGC ACTCCAGCCG CACCGACGAG TCCTACGGCG TCACCGTCGA GAACAACTAC
TGCGTCCGGG TGTCAGGCCA GTGCCTGATC ATGCAGAACG AGCACCGTCC GAGTGCCGAC
GTCCGCGACT ACACCTTCCG CGGCAACGTC TGCGAATCGT TCGGCAGCCA GAACATCGAG
CTGGGAAGCG TCACCGGCGG CACCATCGAG AACAACATCC TGTGCGGCGG CGTCGACGGA
CACGTGATCA CGTTCCACAG CACGGTCGAC GGCCTGGAGA CCACCGACAT CAAGCTGCGC
AACAACATCC TGGCCACGGC GGGCGGATCG GTCTTCGCCG ACGGCAGCAA GGAAGCGCTG
ATCGACGACA CCGACAACAT CGAGGTCACC GACCCCACGA TCGCCGACGA CTGGGAGGAG
TTCGAGGGCA ACCCCGATGC TCCGGTGCTG GCGATCAACC CGGACGACTT CACCGTGTTC
CGGGACCGGT CCCAGCTGGC GGGCGACATC ATCGACGAAG GTTCGCAGCC CAACAGTTCG
GACTTCCATG AGGACGTCGA CGGCGCGGCC CGCGTCCGTG GCGCGACCAT CGACATCGGA
CCGTTCGAGT TCGCATAG
 
Protein sequence
MNKRIVTALI GVTLALTVAG VTVAASADDA ETADRPKYGT DGNGNPETGD CTVSTDEDPQ 
SAVDDAADGD VVCVKPGDHS DSTLNVDNAV TVRANGIVKL RNIVVSGDGA TIDGFTVVGD
ELDDPSTGIK FSGTGHEIVN NLVNGKHIHY AIACDADECA SDVLISRNSV TQTNNFGVYL
WGGSDITVEW NNIYDLWSDE GNDDVDGMRI WGTGHLIRNN YIHDLNVNKG EGEPHADCIQ
NYQHSSRTDE SYGVTVENNY CVRVSGQCLI MQNEHRPSAD VRDYTFRGNV CESFGSQNIE
LGSVTGGTIE NNILCGGVDG HVITFHSTVD GLETTDIKLR NNILATAGGS VFADGSKEAL
IDDTDNIEVT DPTIADDWEE FEGNPDAPVL AINPDDFTVF RDRSQLAGDI IDEGSQPNSS
DFHEDVDGAA RVRGATIDIG PFEFA