Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3334 |
Symbol | |
ID | 8884533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3530451 |
End bp | 3531902 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003512093 |
Protein GI | 291300815 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.920069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.792912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGCAC ACGCACGCCT GGCGGCGACG GCCGTCGCCT CGGCACTGGT CGTCGTCGCG GCGGTGGCAC TGCCGCAGGC GATCGGACAG GCCGACGAGG CGAACCCGCG CCGCGTCATC GACGTGGGTG ACTCCGAGCA GTTGGCCGCG GCGATGTCCG CCGCGAAGGC CGGGGACGAG ATCGTGCTGG CCGACGGCGA GTACGCCATC GACGGCATGA CCGGCAAGCA CGGCACGAAG GACGCGCCGA TCACCGTGGT GGCGAAGAAC CGTGGCCAGG CCGTGATCAA CGAGGGGCAG CTGGAGGTCG ACAAGTCGTC CTATGTGACC TTCGAGGGTC TGACATGGAC CAACAGTGAC ACGCTGAAAC TCACCAGCTC GAACAACGTC CGGCTGACCC GCAACGTGTT CCGGCTGGCC GAGGAGGAGT CGCTGAAGTG GGTCATCATC CAGGGCGCCG ACAGTCACCA CAACCGCGTC GACCACAACG ACTTCGGCGA GAAACACCAG CTGGGCAACT TCGTCACGAT CGACGGATCC GAGACCGAGC AGTCCCAGCA CGACCGTATC GACCACAACC ACTTCCACGA CATCGGTCCC CGCGCCGAGA ACGAGATGGA GGCGGTGCGG ATCGGCCAGA GCTCCATCTC CGAATCCAGC GGCAACACCA TTGTGGAGAA CAATCTGTTC GAGAACTGCG ACGGTGACCC GGAGATCGTG TCGGTCAAGA GCAACGACAA CATCGTCCGC TACAACACCT TCCGCTCCTC GCAGGGCGCT TTGGTGCAGC GGCACGGCAA TCGCGGCCAG CTGTACGGCA ACTTCTTCCT CGGCGAGGGG GAGGAGGGCT CGGGCGGCAT CAGGGTGTAC GGGCAGGACC ACCGGATCTT CGACAACTAC TTCCAGGGCC TGACCGGCAC CGGCTACGAC GCCGCCCTGC AACTCGACGG CGGTGACGTG GACACCGACG GCTCCCTGGA CTCGCACTTC CGGGTCTACC GGGCCACCGT CGTGCACAAC ACCTTCGTCG ACAACGTGTC CAATATCGAG ATCGGCGCCA ACTACGAGCA CGCCCCGGCC GACTCGATCG TCGCCGACAA CGTGGTGACC GGCGGCGAGG GCAAGCTGTT CAACGAACTC AAGACTCCCA AGAACCACAC GTACCAGGGC AACATCGCCT GGCCGACCGG CACGGCCACT GTGGGCGTCG ACGCACCCGA GGACGCCATC GCCGTGACCG ACCCCCGGCT GACCGACGCC GACGGCCTGT ACCGGCTCGG CGAGAACAGC CCGGCGATCG ACGCCGCCAG CGCCACACAC GAGTTCGTCA CCGACGACAT GGACGGCCAG GACCGCGACG ACAAGCCCGA CACCGGCGCC GACGAGCGGT CCACGGCCGA CGTCACCCGC CACCCGCTCA GCCCCGGCGA CGTCGGCCCC GACGCCCCGT AG
|
Protein sequence | MKAHARLAAT AVASALVVVA AVALPQAIGQ ADEANPRRVI DVGDSEQLAA AMSAAKAGDE IVLADGEYAI DGMTGKHGTK DAPITVVAKN RGQAVINEGQ LEVDKSSYVT FEGLTWTNSD TLKLTSSNNV RLTRNVFRLA EEESLKWVII QGADSHHNRV DHNDFGEKHQ LGNFVTIDGS ETEQSQHDRI DHNHFHDIGP RAENEMEAVR IGQSSISESS GNTIVENNLF ENCDGDPEIV SVKSNDNIVR YNTFRSSQGA LVQRHGNRGQ LYGNFFLGEG EEGSGGIRVY GQDHRIFDNY FQGLTGTGYD AALQLDGGDV DTDGSLDSHF RVYRATVVHN TFVDNVSNIE IGANYEHAPA DSIVADNVVT GGEGKLFNEL KTPKNHTYQG NIAWPTGTAT VGVDAPEDAI AVTDPRLTDA DGLYRLGENS PAIDAASATH EFVTDDMDGQ DRDDKPDTGA DERSTADVTR HPLSPGDVGP DAP
|
| |