| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3332 |
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| Symbol | |
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| ID | 8884531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3525878 |
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| End bp | 3528955 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512091 |
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| Protein GI | 291300813 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00786892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.331119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACA CCGCCAGCCG CAGCCGGAAC GAGCCCGACG CGACGCCCAC CCCGGCGTCC
GGCGGCGACA CCGGCTTCCG GCTGCTGGGC CCACTCGAGG TGACCCACCA CGGCGAGGTC
CTCGAGGTTC CGCCCGGACG GCAGCAGGCG CTGCTCGCGG CACTGCTGCT GCGGCCGGGC
GAGATCGTGT CGGCACCGAC GCTCATCGAG CAGGTCTGGG GCGGCGACGC CGATCGCACC
GTCCTCAACG TGTGCGTGAT GCGACTGCGA CGGTCCCTCA AGGACCCCAA CCGCGAACTG
GTTCGCGCCG AGGGCAACGG TTACCGCATC GCGGCCGCAC CCGACACCGT CGATCTGCAC
CGGTTCCGGA AACTGTGCGA GCGGGCCGGA ACGGCCCGCG ACCGAGGCGA CCCCGCGGCC
GAACGCGACG CCCTCCACCA GGCACTCGCG TTGTGGCGCG GCGACGCCCT GTCCGGGATC
GCCTCGTCGG TGCTGCAAGC CGAGGTCGTG CCGATCCTCG AAGAGGAGCG GCTGGCCGCG
ACCGAACGAC GCGTGGACGC CGACCTCGAC GGCGAGGCCC ACGCCGAGGT GATCGGCGAA
CTGCGCCAGC TGGTCGCCGA TCACCCGTTC CGGGAACGGT TCTGGTGCCA GCTGCTGCTG
GCCCTGTACC GGTCGGGCCG CCAGTCCGAG GCGCTGGACG CCTACCGCAC GGCACGGGAA
CGACTCGCCG ACGAGCTCGG CATCGAGCCG AGCCAGGAGT TGCGCGAGCT CCACCACCGC
ATCCTCACTT CCGATCCGAC GCTGCTGACG CCCCGGCCCG CCGAGCCGTC GGTCCCACGT
GTCGTCCCGG CCCAACTGCC CCCCGCCACA GCCGGATTCA GCGGCCGCAG AGACCAACTG
CGGCAGCTGG ATCGCCTACT TGACGACACC GAACCCGCAC CAACCACATT GATCACCGGG
CCGCCGGGAG CCGGTAAGAC GACCCTGGCG GTGCACTGGG CCGGTCGCCA CCGTGACCGG
TGGCCCGACG GTCAGCTCTA CATCGACCTG CGCGGATACG GGCCCGAGCC GTTGGTCCAG
CCGATCGAGG CCCTGGCGTA CTTCCTGCGC GCGATCGGAC TGCCTACCGA CCAGGTGCCA
CCTCAGCAGG CGGAGGCGTC GGCTTTGTTC CGGTCACGGA TCGCCGGCCG CAGGCTGCTG
ATCGTGCTCG ACAATGCCGC CACCGTCGAT CAAGTGCGTC CACTGCTGCC CGGCGGTGGC
GACTGTCTGG CCATAGTGAC CAGCCGAGAC CGGTTGACCG GCCTGGTCGC CAAGGAGGGC
GCCCGTGTCC TGAGTGTCGA CGTGATGGCC GACGCCGAAG CCCAGACACT GCTGTCCGAT
GCCGTCGGTG ACGCCCGGCT CGCCGCCGAA CCCGATGCGG CCGCCGCACT GGCACGCCTG
TGTGGCAACC TGCCGCTGGC GCTGCGGATC ACGGCCGCAG ACCTGATCAA CCATCCACAG
CGGAGTCTCA CCCGGCACGT GGACCGGCTG CGCACCGGCA ACCGCCTGGA CGCGCTTCAG
GTCGCCGACG ACGACGGTAC CGCGGTGCGA GCGGCCTTCC GATCCTCCTA CGCTCGACTG
CCCGAACCAG TGAGGCGACT GTTCCGGTTG CTGGGACTGT TCCCCGGTTC GGAGATCGGC
CTGGAGTCCG CCGCCTCGCT GGCGGGCGTC GAGGCCGCCG CGACCGAACC GCTGCTGGAT
CGTCTGATCT CCGCCCATCT GGTGACGCCG CGGGGAGCCG AACGGTTCGC GTTGCACGAT
CTGCTGCGCT TGTTCGCCCA GGAGCTGGGG CAGGAGGAGG ACGCCGACGC CGAACGCGAG
GCCGCCACGC GGCGGCTCTA CGACCACTAT TCACGCGTCG CCGTCGCCGC GGCGAATCGG
ATGTACTCGT TCGTGGTGAC GCTGCCGTTG TCGGAGGAGG CGGCGAGGAT CCCGGTGAGC
TTCGACGACG ACACCACGGC GTCGGCATGG TTCGACACCG AACACCCCAA CCTCGTCGCA
CTGGTTCGGT ACGCCGCCGA TCGCGGCGAC CACCTCGACG CCTGCCGGCT GGCCGCCACG
ATGCAAAGCT ATCTGCACAG CAAGATGCAC GCCGTCGACT GGCTCAACGT CGCTCGCGCC
TATCTGTTCG CCGCCCGCCA GATTGTGGAT TTCAGGGCCC AGATCCTGGC TCATCTGAGC
TTGGCCAACC TGCACCGCTC CCGCGCTCAG CGTAACGCCG CCATCAAACA CTTCGAGCAG
GCGCTGGCGT TGAGCCGTCA CAGCGGCTGG GTCGACGGAC AGTCCATAAC CCACAACAAT
CTCAGTGGTG TCTACGACTA CGAGGGAAAA CTGCGACTGA CGGTTCATCA CCTGCATCAG
GCGCTGGAAC TGCGCTCGCC AACGCGGGAC ATCACGTCGA AGGCGGTCGT TCTCAGCAAC
CTCGGCAGGG CGTTGCTGCG GTTGGGGCAC GTGGAGGACG CGGTCGACCA CCTGGAACGT
GCGACGAACA TTCACCAACG GCGCGGTGCC AGGGTGAGCG AGTCCCGCAG CCGCGCCAGT
CTCGGCGAGG CACTGTGCGA GCTGGGACAG CACCACCGTG CGCTGGCATT GCTGAACCAC
GCGGTAGCGG TGCAACGGGA GCTGGACGAC AGAATGTTCC TACCCAACAC CCTGTGCCGA
CTGGCGAACG CCCACCTCGA CGTCGGCCAG ACCGATCTCG CCGCCGAACT GGTGCCGACC
GCGATGGCAC TGGTACGCGA AACCGGACAT CGCCGTTCAG AGGCATGGGT CACCTACGTG
ACCGCCCGGG TGCATGAGCA CACCGGCTGC CCTGATGCCG CGCTCGATGG CTACGCCCAG
GCGCTACGGC TGAGCCGGGA ACGCGGTAAC GGATATCTTC AGGTGCAGGC GATGATCGGC
ATGAGCTCCG CCCATCACCA ACTCGGTCAG CGGGAGTCGG CCCGCCGCTG TATCGACAAG
GCCCTCGCGA GAGCTCGCCG TTTCGAGTAC GCGCTTCTGG AACGACAGGC CGAGGCCGTC
CGGGTCGCCC TGAGCTGA
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| Protein sequence | MTDTASRSRN EPDATPTPAS GGDTGFRLLG PLEVTHHGEV LEVPPGRQQA LLAALLLRPG
EIVSAPTLIE QVWGGDADRT VLNVCVMRLR RSLKDPNREL VRAEGNGYRI AAAPDTVDLH
RFRKLCERAG TARDRGDPAA ERDALHQALA LWRGDALSGI ASSVLQAEVV PILEEERLAA
TERRVDADLD GEAHAEVIGE LRQLVADHPF RERFWCQLLL ALYRSGRQSE ALDAYRTARE
RLADELGIEP SQELRELHHR ILTSDPTLLT PRPAEPSVPR VVPAQLPPAT AGFSGRRDQL
RQLDRLLDDT EPAPTTLITG PPGAGKTTLA VHWAGRHRDR WPDGQLYIDL RGYGPEPLVQ
PIEALAYFLR AIGLPTDQVP PQQAEASALF RSRIAGRRLL IVLDNAATVD QVRPLLPGGG
DCLAIVTSRD RLTGLVAKEG ARVLSVDVMA DAEAQTLLSD AVGDARLAAE PDAAAALARL
CGNLPLALRI TAADLINHPQ RSLTRHVDRL RTGNRLDALQ VADDDGTAVR AAFRSSYARL
PEPVRRLFRL LGLFPGSEIG LESAASLAGV EAAATEPLLD RLISAHLVTP RGAERFALHD
LLRLFAQELG QEEDADAERE AATRRLYDHY SRVAVAAANR MYSFVVTLPL SEEAARIPVS
FDDDTTASAW FDTEHPNLVA LVRYAADRGD HLDACRLAAT MQSYLHSKMH AVDWLNVARA
YLFAARQIVD FRAQILAHLS LANLHRSRAQ RNAAIKHFEQ ALALSRHSGW VDGQSITHNN
LSGVYDYEGK LRLTVHHLHQ ALELRSPTRD ITSKAVVLSN LGRALLRLGH VEDAVDHLER
ATNIHQRRGA RVSESRSRAS LGEALCELGQ HHRALALLNH AVAVQRELDD RMFLPNTLCR
LANAHLDVGQ TDLAAELVPT AMALVRETGH RRSEAWVTYV TARVHEHTGC PDAALDGYAQ
ALRLSRERGN GYLQVQAMIG MSSAHHQLGQ RESARRCIDK ALARARRFEY ALLERQAEAV
RVALS
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