Gene Snas_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3321 
Symbol 
ID8884520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3509392 
End bp3510510 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003512080 
Protein GI291300802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.137522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.10557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTG ACGGCATCGA CGTGTGGGTC GTCAACGTGC CCTACCGGTC GGCCTTCGTC 
AGCTCGTTCG AGGTCCGACG CGGCACCACC CGGACCGTGG TGCGCCTGCG CACCGACACC
GGGCTGGTCG GGTGGGGCGA GACCATGCAC GGCGATCCCG TCGCGGCCCT GACCAGGAAA
CTGTTCGACA CGTACCGAGG CCGCAGCCCC TACGACGTCG AAGCCGTCGC GGCCGAACTG
GCGATGGTGC CGTTCTTCTA CGGCTACCTC GGCTACGCCG CACTCGCCGG TCTGGAGATG
GCCTGCCATG ACCTGATGGC CAAAGCCGCC GGGCAACCCC TGCATCGGCT GATCGGCGGC
GGAATGACCG ACCGGATAGC ACTGACCTAT GTACTCACGC CTCCGGAGGA TACCGGCGCG
GCCACCGCCG ACGCCATCGC CGACGAGGCC GCCGACGCCG TCACGCGGGG CTACCGGGCG
CTGAAGCTCA AGGGCAGCCA CGACCCGGCG ATCGACCTGG GATACCTGGA GGCCATCCGC
GAGCGGCTAC CCGACCTCGC GCTGCGGGTC GACCCCAACG GACACTGGCC GCTGGCGCGC
ACGCTCCAGT ACGCCCGCCG CATCGAGGAG CTGCGGCTGG AGTACCTGGA GGACCCATGC
CCCGACCTGG CCACGATGGC GCAGGTTCGC GAGCGGGTGC GCGTCCCGTT GTGCACCAAC
ATGTGCGTGG TCCGGTTCGA GGACGTCGTC CCGGCGATCG AGCTGGGCGC CGTCGACGTG
GTGCACGGCG ACGTCTTCAA ATGGGGCGGC ATCGCGCCGA CCAAGCGGCT GGCCGGGATC
TGCGCCACCA CCGGCTGGGG CATGAACCTG CACAGCGGCG GCGAGCTCGG GCTGGCCACG
GCGGCGCACC TGCAGGTCGC GGCGGCGACC CCGCAGATCA GCTATCCGAT CGATACCGTC
TACTACCTGT TCGAGGACGA CATCCTCAGC TCCACGCTGC CCATCGTCGA TGGCGAGCTG
GCCGTGCCCG ACGGCCCCGG TCTCGGTGTC GAGCCCGATC TCGACAAACT CGCGCACTTC
GCCAGCCTCC ACTCTGAACA AGGTGATCTG TTGCTGTAG
 
Protein sequence
MIIDGIDVWV VNVPYRSAFV SSFEVRRGTT RTVVRLRTDT GLVGWGETMH GDPVAALTRK 
LFDTYRGRSP YDVEAVAAEL AMVPFFYGYL GYAALAGLEM ACHDLMAKAA GQPLHRLIGG
GMTDRIALTY VLTPPEDTGA ATADAIADEA ADAVTRGYRA LKLKGSHDPA IDLGYLEAIR
ERLPDLALRV DPNGHWPLAR TLQYARRIEE LRLEYLEDPC PDLATMAQVR ERVRVPLCTN
MCVVRFEDVV PAIELGAVDV VHGDVFKWGG IAPTKRLAGI CATTGWGMNL HSGGELGLAT
AAHLQVAAAT PQISYPIDTV YYLFEDDILS STLPIVDGEL AVPDGPGLGV EPDLDKLAHF
ASLHSEQGDL LL