Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3321 |
Symbol | |
ID | 8884520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3509392 |
End bp | 3510510 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003512080 |
Protein GI | 291300802 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.137522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.10557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCATTG ACGGCATCGA CGTGTGGGTC GTCAACGTGC CCTACCGGTC GGCCTTCGTC AGCTCGTTCG AGGTCCGACG CGGCACCACC CGGACCGTGG TGCGCCTGCG CACCGACACC GGGCTGGTCG GGTGGGGCGA GACCATGCAC GGCGATCCCG TCGCGGCCCT GACCAGGAAA CTGTTCGACA CGTACCGAGG CCGCAGCCCC TACGACGTCG AAGCCGTCGC GGCCGAACTG GCGATGGTGC CGTTCTTCTA CGGCTACCTC GGCTACGCCG CACTCGCCGG TCTGGAGATG GCCTGCCATG ACCTGATGGC CAAAGCCGCC GGGCAACCCC TGCATCGGCT GATCGGCGGC GGAATGACCG ACCGGATAGC ACTGACCTAT GTACTCACGC CTCCGGAGGA TACCGGCGCG GCCACCGCCG ACGCCATCGC CGACGAGGCC GCCGACGCCG TCACGCGGGG CTACCGGGCG CTGAAGCTCA AGGGCAGCCA CGACCCGGCG ATCGACCTGG GATACCTGGA GGCCATCCGC GAGCGGCTAC CCGACCTCGC GCTGCGGGTC GACCCCAACG GACACTGGCC GCTGGCGCGC ACGCTCCAGT ACGCCCGCCG CATCGAGGAG CTGCGGCTGG AGTACCTGGA GGACCCATGC CCCGACCTGG CCACGATGGC GCAGGTTCGC GAGCGGGTGC GCGTCCCGTT GTGCACCAAC ATGTGCGTGG TCCGGTTCGA GGACGTCGTC CCGGCGATCG AGCTGGGCGC CGTCGACGTG GTGCACGGCG ACGTCTTCAA ATGGGGCGGC ATCGCGCCGA CCAAGCGGCT GGCCGGGATC TGCGCCACCA CCGGCTGGGG CATGAACCTG CACAGCGGCG GCGAGCTCGG GCTGGCCACG GCGGCGCACC TGCAGGTCGC GGCGGCGACC CCGCAGATCA GCTATCCGAT CGATACCGTC TACTACCTGT TCGAGGACGA CATCCTCAGC TCCACGCTGC CCATCGTCGA TGGCGAGCTG GCCGTGCCCG ACGGCCCCGG TCTCGGTGTC GAGCCCGATC TCGACAAACT CGCGCACTTC GCCAGCCTCC ACTCTGAACA AGGTGATCTG TTGCTGTAG
|
Protein sequence | MIIDGIDVWV VNVPYRSAFV SSFEVRRGTT RTVVRLRTDT GLVGWGETMH GDPVAALTRK LFDTYRGRSP YDVEAVAAEL AMVPFFYGYL GYAALAGLEM ACHDLMAKAA GQPLHRLIGG GMTDRIALTY VLTPPEDTGA ATADAIADEA ADAVTRGYRA LKLKGSHDPA IDLGYLEAIR ERLPDLALRV DPNGHWPLAR TLQYARRIEE LRLEYLEDPC PDLATMAQVR ERVRVPLCTN MCVVRFEDVV PAIELGAVDV VHGDVFKWGG IAPTKRLAGI CATTGWGMNL HSGGELGLAT AAHLQVAAAT PQISYPIDTV YYLFEDDILS STLPIVDGEL AVPDGPGLGV EPDLDKLAHF ASLHSEQGDL LL
|
| |