Gene Snas_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3319 
Symbol 
ID8884518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3507129 
End bp3508541 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, GntR family with aminotransferase domain-containing protein 
Protein accessionYP_003512078 
Protein GI291300800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.823033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.073144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC CCTGGTACGC GATACGTGAG CTGCTGTTGG CCGACGACGC CGTCGACCAC 
GGCAAGCGCG GCCGCCGCAC CGAACGCGCA CTGCGCGAGG CGATCCGTTC CGGCCGCGTC
CCACCCGGGA CCCGACTGCC GTCGTCGCGG GACCTGGCCC GGCAACTGGA CGTCGCCCGG
GGCACCGTCA CCGCCGCCTA CCGGCAGCTG ACGGCCGAGG GATACGTGAG CACGCGCCCC
GGTTCGGGTA CCTACGTCGC CGCCTCGTCC GGCCCCGGCC CGGTGGCCGA GCCCGCCGCC
GCGCCGACGC GGTACCCGGC GTTCGAGTTC GACCTGCGCA CCGGCATCCC CGCGCTGTCG
GACTTCCCGC GCACCGCGTG GCTGGCGGCC ACCAAACGCG CCCTGGCGGA ACTGCCGGAC
GCGGCACTGG CCTACCCCGA CACCGCTGGC CTGCCGTCGT TGCGGCAAGA ACTGACCGCG
TACCTGGGTC GGGTGCGCGC GGTGACCACC ACGGCCGACG GCGTGCTCGT CACCCACGGC
GCCGCCGAAG CGCTAGCGTT GCTGGCCCGG GCGCTGCGCG ACGCCGGTCA TCGCCGCATC
GCGGTGGAGG ACCCCTGCTA CCCCGGCCAG GTCGAGTTGC TGTCGGGCAA CGGCCTGGAA
CCGGTACCGG TACCGGTCGA CGACGCCGGG CTCGACGTGG AAGCGTTGCG GCGCACCGGT
TGCCGGGCCG TGGTGATCAC CGCCGCGCAC CAGTATCCGC TGGGGGTGGT GCTCCAACCG
CGACGTCGGC TCGCGCTGCT GGAGTGGGCG GCGGACAACG ACGCCCTGAT CGTCGAGGAC
GACTACGACG CCGAGCACCG CTACGACCGC CCCGCCGTGG CCGCGCTCCA GGGGCTCGCC
CCGACCCGGG TGGCGTACAT CGGCACCACC AGCAAGACCC TGGCCCCGGG GCTGCGGTTG
GGATGGCTGG TCGCCCCGGC CCGGTTCCAC CGGGACGTGT TGCGCGGCAA GGACGTCCTC
AACCGTGGCG GCAGCGTCAT CGAGCACGCC GCCTTCGCCA CGTTCCTGCG GCACGGCGGC
TACGACCGGC ATCTGGGCCG CACCCGCCGC ATGTACCGGC AGCGGCGCGA CGCCCTCGTC
GAAGCCCTCG CCACCCGACT CCCCCACTGG CGGCCCACCG GCGTGGCCGC CGGACTGCAC
GTCGTGGTGC GACTGCCGCC GAACACATCG GACTCCACAT TGGCCGCAAG GCTCGCCGAC
GCCGGTGTCA ACGTGATCGC CCTGTCGCGC TACATGCGCA CCGACACCCT CCCGTTCCCC
GGCCTGGTCA TCGCGTACGC GGCGACCACA CCCGACCGGT TGCGTGCGGC GGTCGACCGG
ATGGCGCAGG TCACAACCAC CTCCGTTCCA TGA
 
Protein sequence
MPDPWYAIRE LLLADDAVDH GKRGRRTERA LREAIRSGRV PPGTRLPSSR DLARQLDVAR 
GTVTAAYRQL TAEGYVSTRP GSGTYVAASS GPGPVAEPAA APTRYPAFEF DLRTGIPALS
DFPRTAWLAA TKRALAELPD AALAYPDTAG LPSLRQELTA YLGRVRAVTT TADGVLVTHG
AAEALALLAR ALRDAGHRRI AVEDPCYPGQ VELLSGNGLE PVPVPVDDAG LDVEALRRTG
CRAVVITAAH QYPLGVVLQP RRRLALLEWA ADNDALIVED DYDAEHRYDR PAVAALQGLA
PTRVAYIGTT SKTLAPGLRL GWLVAPARFH RDVLRGKDVL NRGGSVIEHA AFATFLRHGG
YDRHLGRTRR MYRQRRDALV EALATRLPHW RPTGVAAGLH VVVRLPPNTS DSTLAARLAD
AGVNVIALSR YMRTDTLPFP GLVIAYAATT PDRLRAAVDR MAQVTTTSVP