Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3319 |
Symbol | |
ID | 8884518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3507129 |
End bp | 3508541 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, GntR family with aminotransferase domain-containing protein |
Protein accession | YP_003512078 |
Protein GI | 291300800 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.823033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.073144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACC CCTGGTACGC GATACGTGAG CTGCTGTTGG CCGACGACGC CGTCGACCAC GGCAAGCGCG GCCGCCGCAC CGAACGCGCA CTGCGCGAGG CGATCCGTTC CGGCCGCGTC CCACCCGGGA CCCGACTGCC GTCGTCGCGG GACCTGGCCC GGCAACTGGA CGTCGCCCGG GGCACCGTCA CCGCCGCCTA CCGGCAGCTG ACGGCCGAGG GATACGTGAG CACGCGCCCC GGTTCGGGTA CCTACGTCGC CGCCTCGTCC GGCCCCGGCC CGGTGGCCGA GCCCGCCGCC GCGCCGACGC GGTACCCGGC GTTCGAGTTC GACCTGCGCA CCGGCATCCC CGCGCTGTCG GACTTCCCGC GCACCGCGTG GCTGGCGGCC ACCAAACGCG CCCTGGCGGA ACTGCCGGAC GCGGCACTGG CCTACCCCGA CACCGCTGGC CTGCCGTCGT TGCGGCAAGA ACTGACCGCG TACCTGGGTC GGGTGCGCGC GGTGACCACC ACGGCCGACG GCGTGCTCGT CACCCACGGC GCCGCCGAAG CGCTAGCGTT GCTGGCCCGG GCGCTGCGCG ACGCCGGTCA TCGCCGCATC GCGGTGGAGG ACCCCTGCTA CCCCGGCCAG GTCGAGTTGC TGTCGGGCAA CGGCCTGGAA CCGGTACCGG TACCGGTCGA CGACGCCGGG CTCGACGTGG AAGCGTTGCG GCGCACCGGT TGCCGGGCCG TGGTGATCAC CGCCGCGCAC CAGTATCCGC TGGGGGTGGT GCTCCAACCG CGACGTCGGC TCGCGCTGCT GGAGTGGGCG GCGGACAACG ACGCCCTGAT CGTCGAGGAC GACTACGACG CCGAGCACCG CTACGACCGC CCCGCCGTGG CCGCGCTCCA GGGGCTCGCC CCGACCCGGG TGGCGTACAT CGGCACCACC AGCAAGACCC TGGCCCCGGG GCTGCGGTTG GGATGGCTGG TCGCCCCGGC CCGGTTCCAC CGGGACGTGT TGCGCGGCAA GGACGTCCTC AACCGTGGCG GCAGCGTCAT CGAGCACGCC GCCTTCGCCA CGTTCCTGCG GCACGGCGGC TACGACCGGC ATCTGGGCCG CACCCGCCGC ATGTACCGGC AGCGGCGCGA CGCCCTCGTC GAAGCCCTCG CCACCCGACT CCCCCACTGG CGGCCCACCG GCGTGGCCGC CGGACTGCAC GTCGTGGTGC GACTGCCGCC GAACACATCG GACTCCACAT TGGCCGCAAG GCTCGCCGAC GCCGGTGTCA ACGTGATCGC CCTGTCGCGC TACATGCGCA CCGACACCCT CCCGTTCCCC GGCCTGGTCA TCGCGTACGC GGCGACCACA CCCGACCGGT TGCGTGCGGC GGTCGACCGG ATGGCGCAGG TCACAACCAC CTCCGTTCCA TGA
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Protein sequence | MPDPWYAIRE LLLADDAVDH GKRGRRTERA LREAIRSGRV PPGTRLPSSR DLARQLDVAR GTVTAAYRQL TAEGYVSTRP GSGTYVAASS GPGPVAEPAA APTRYPAFEF DLRTGIPALS DFPRTAWLAA TKRALAELPD AALAYPDTAG LPSLRQELTA YLGRVRAVTT TADGVLVTHG AAEALALLAR ALRDAGHRRI AVEDPCYPGQ VELLSGNGLE PVPVPVDDAG LDVEALRRTG CRAVVITAAH QYPLGVVLQP RRRLALLEWA ADNDALIVED DYDAEHRYDR PAVAALQGLA PTRVAYIGTT SKTLAPGLRL GWLVAPARFH RDVLRGKDVL NRGGSVIEHA AFATFLRHGG YDRHLGRTRR MYRQRRDALV EALATRLPHW RPTGVAAGLH VVVRLPPNTS DSTLAARLAD AGVNVIALSR YMRTDTLPFP GLVIAYAATT PDRLRAAVDR MAQVTTTSVP
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