Gene Snas_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3308 
Symbol 
ID8884507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3496099 
End bp3497313 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content74% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003512068 
Protein GI291300790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.18437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.715302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCG ACATGCCATC CACCAAAGAC TCAGCCGCCT CCCGGCCCCG CCGTGGCGAA 
GCCGCGCGCT GGCAGACCGC CGTCGACGTG CTGCGGCTCG TGCGCCGCCA GCCCGGCATC
ACCCGGGCCG CCGCCGCCCA GACCCTGCGG CTGAGCAGCA GCTCGGCCAC CGAGGTCACC
ACCCGGCTGC GGCAGCTCCA CCTCGTCGAG GAGACCGTCG CCGCCACCAC CGGCCGCGGC
CGGCCCACCG GCGCGTTGCG CGCCAACCCC GACGGCCCCA CCGTCGCCGT CGTCAACATC
CGGCACGAGG ACTTCCAGAT CGCCGTCGTC GACCTGGACG GCACCATCGT CGAGACGCAC
CAGGGCCGCC ACACCGGCGA CGATCCGGCG GGGCTCATCG CGCGGCTGCG CACCGACCTT
CGCGAGGTGC GCGACGACTA CGGCTTCCGG TTGCGTGCCG TGTCCATCGT CGTGGCGGGC
ACGGTCAGCT CCGGCCGCCT GGTGCAGGCC AGCACTTTGG ACTGGCACGA CGTCGACCTG
GGGGCGCTGG ACGACGGCCA CCAGCCGAGG CTGCCGATCC TCATGGGCAA CGACGCCACC
CTCGCGGGGG TCGCCGAAGC GCGCCGAGGC AGCGGCCGCG ACTCGCGCAC CATGCTGTAT
CTGACCATTG AGGTCGGTGT GGGAGGTGTG CTCATCGACA ACGGCGTCCC GGCCGCCGGA
GCCACCGGGG CCGGTGGCGA GTTCGGGCAC CTGCCCTTCG GTGACCGGGA CCTGGCCTGC
CCCTGCGGGG CCCGGGGCTG CTGGGACCTG GAGGTCGACG GCCGCGCCAT GGCCCGGCAC
CGGGGTGACC GTCCACCCCA CGACCCCCGC AGCTACGCCG TCGAGGCGAT GACCCGCGCC
GACGGCGATC CGGCCACCAC GGCGGCGGTG CGGCGCTGCG CCACCGCGTT CGGCAGCGGC
GTCGCCGGAC TGGTCAACGC GCTCGACCCC GACACCGTCG TCCTGGGTGG ACTCGCTCCC
CAACTGCGGC AACTGTTCCC CGACGCCGTC GCCGAGGGCT TCGACTCGGG GCTGATGGTG
TTCCGCCGCG CGTCTCCCCC ACCGCTGCTG GCCACCTCGC TCGGTGCCCA GGCGGCGGTC
CTCGGTGCCG CCGAGGTCGC GTTCGACGCG ATCCTCACCG CCACCGGGCT GGCCGAATGG
GCGGCCCAGC CATGA
 
Protein sequence
MVRDMPSTKD SAASRPRRGE AARWQTAVDV LRLVRRQPGI TRAAAAQTLR LSSSSATEVT 
TRLRQLHLVE ETVAATTGRG RPTGALRANP DGPTVAVVNI RHEDFQIAVV DLDGTIVETH
QGRHTGDDPA GLIARLRTDL REVRDDYGFR LRAVSIVVAG TVSSGRLVQA STLDWHDVDL
GALDDGHQPR LPILMGNDAT LAGVAEARRG SGRDSRTMLY LTIEVGVGGV LIDNGVPAAG
ATGAGGEFGH LPFGDRDLAC PCGARGCWDL EVDGRAMARH RGDRPPHDPR SYAVEAMTRA
DGDPATTAAV RRCATAFGSG VAGLVNALDP DTVVLGGLAP QLRQLFPDAV AEGFDSGLMV
FRRASPPPLL ATSLGAQAAV LGAAEVAFDA ILTATGLAEW AAQP