Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3280 |
Symbol | |
ID | 8884479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3466806 |
End bp | 3468242 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative L-arabinose isomerase protein |
Protein accession | YP_003512042 |
Protein GI | 291300764 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.226314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.533045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAGC TCGCCGTCCC CGCAGTCCAG CGCGTCCCCG CGCGGCCGGT CAAGATCGGC CTGGTCGCGG GCGGGCTCGG CGCCTACTGG CCGCAGTTTC CCGACCTGCT GCCCGCGCTG AAACAGTCGG CCGCCCGGGT GTCGGACAAG ATGCGCGACC TGGGCGCCGA CATCACCGAC GTCGGCTTCA TCTCCGACGA ACGCGAAGCC GCCGACGCGG CCGAACGGCT GCGCGTCGCC GGTTGCGACC TCGTGGTGGT CTACCTGACC ACCTACATGA CCGCCTCGAT GGTGGTGCCG ATCGCGCAGC GGGTGGACGC CCCCATCCTG TGCCTCAACC TCCAGCCCAC CGAGGCCATG GACCACGCGA CAGTGGACAC CGGCCGCTGG CTCGCCTACT GCGGCGCCTG CCCGCTGCCC GAAGTCGCCA ACGCCTTCGA ACGCTGCGGC ATCGGTTTCC GTTCCGTCTC AGGGCATCTG GAGGACGCCA ACGCGTGGAA CCGCATCGCC CGCTGGATCG CCGCGGCGGG AGTGCGCGGC GGACTGCGCA CCGCACGGCA CGGGCTGATG GGCCACCTGT ACCCGGGCAT GCTGGACGTC TCCACCGACC TGACCATGGT CACCGCCTCC TTCGGCGGTC ACATCGAGGT CCTCGAATAC GACGACCTGC GGGTGCGCAC CCACGCCGTC ACACCCTCCG AAGTGGAAGC CAAGCTGGCG CAGGCCCGCG AGATCTTCGA GGTCACCGAC TCCGTGGTCG ACGAGGATTT CGAGTGGGGC GCACGAGTCG CCTGTGGACT GGACCGGCTG GTGGACGACT TCGGCCTCGA CAGCCTCGCC TACTATCACC GCGGCCTCGA AGGCGAACAA CACGAACGCC TCGCCGCCGG GATGATCCTC GGCGCCTCGC TGCTGACCGC CCGCGGCATC CCCGCCGCCG GAGAGTACGA GCTGCGCACC TCACTGGCGA TGCTCATCGC CGACCGGCTG GGCGCGGGCG GATCGTTCAC CGAACTACAG GCGCTGAACT TCCGCGACGG CGTCGTCGAG ATGGGACACG ACGGCCCCGC GCACCTGGCG ATCAGCAACG GCCGTCCACT GCTGCGCGGA CTCGGCGTCT ACCACGGCAA ACGCGGCTGG GGCGTGTCGG TGGAACTCGA CGTGGCCCAC GGACCGGTCA CCCTGCTGGG CGTCGGCCAG ACCCGCGACG GCTCCTACCG CCTGATCGCC GCCGAGGGCA ACATCGTGGA CGGACCCCTG ATGCGCATCG GCAACACGAC CTCCCGGGTT GACTTCGGCC GCGACCCGGG CGAATGGACC GACGACTGGA GCGCCAGCGG TGTCGGCCAC CACTGGGCAC TCGCGGTGGG ACACCGCGTC GGTGAGCTGC GCTGCACCGC CGAACTGCAA GGTCTGGAGC TGGTCGAGGT CCGCTAG
|
Protein sequence | MTELAVPAVQ RVPARPVKIG LVAGGLGAYW PQFPDLLPAL KQSAARVSDK MRDLGADITD VGFISDEREA ADAAERLRVA GCDLVVVYLT TYMTASMVVP IAQRVDAPIL CLNLQPTEAM DHATVDTGRW LAYCGACPLP EVANAFERCG IGFRSVSGHL EDANAWNRIA RWIAAAGVRG GLRTARHGLM GHLYPGMLDV STDLTMVTAS FGGHIEVLEY DDLRVRTHAV TPSEVEAKLA QAREIFEVTD SVVDEDFEWG ARVACGLDRL VDDFGLDSLA YYHRGLEGEQ HERLAAGMIL GASLLTARGI PAAGEYELRT SLAMLIADRL GAGGSFTELQ ALNFRDGVVE MGHDGPAHLA ISNGRPLLRG LGVYHGKRGW GVSVELDVAH GPVTLLGVGQ TRDGSYRLIA AEGNIVDGPL MRIGNTTSRV DFGRDPGEWT DDWSASGVGH HWALAVGHRV GELRCTAELQ GLELVEVR
|
| |