Gene Snas_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3277 
Symbol 
ID8884476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3463488 
End bp3465200 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content69% 
IMG OID 
Productarginyl-tRNA synthetase 
Protein accessionYP_003512040 
Protein GI291300762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.431918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.529534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCG CGATCCGACG CGCCTGCCCG CAGCCCGAGC AGCCCGACGC GATGGTGCGA 
CGCAGCGACC ACGCCGACTT CCAGACCAAC GGCATCCTGC CACTGGCCAA ACAGGCCGGA
CAACAACCGC GTGACCTCGC TGTCGCGGTC GTCGACCAAC TCGACCACGG CGACCTCCTC
AGCGAGGTCA CGGTCGCCAG TCCGGGATTC GTCAACATCA CCGTCACCGA CGCGGCCGTG
TGGCGGCAGG TCGAGCAACG CCTCGCCGAT TCCCTCCTGG GGCTCGGGCA GCCCGAAGCC
GGGTCGACGA CCGTCGTCGA CTATTCCGCG CCCAATGTGG CCAAACAGAT GCACGTGGGC
CACCTGCGCT CCACGGTCAT CGGTGACGCG CTCGCCCGGC TGCTGGAAGC CCTTGGCGCC
ACGGTGATCC GTCAGAACCA CCTCGGCGAC TGGGGTACCC AGTTCGGCAT GCTCATCCAG
TACCTCGATG AACACCCCGA CCTCGACTGG CATCGGCGCG GTGACCACTC CCCCGGCATC
GACACCCTCG ACGCCCTCTA CCGGGCCGCT CGCGCCGTCT TCGACACCGA CACTGACTTC
GCCGACCGCT CCCGCAAACG GGTCGTGGCA CTGCAATCCG GCGATGCCGC CACCGTCGCG
GTCTGGCGAG ACCTGGTGCG CACCTCCATG GAGGCGTTCA ACGCGATCTA TCGCCGCCTC
GGCGTCAGCC TGACCGACGA GCACCTGGCG GGCGAATCCT CCTACAACCC GCTGCTCGCC
GACGTGGTCT CGGCACTGGT CGAAGCCGGA ATCGCCGTCG AGTCCGACGG CGCGCTGTGC
GTGTTCGACG ACCGGTTCAC CGGCCACGAA GGTCAACCGA TTCCGCTCAT CGTCCGCAAG
CGCGACGGCG GGTTCGGTTA CGCCGCCACC GATCTGGCCA CCATCCGCCA CCGCGCCCAA
GACCTCGGGG CCGACCGGGT CCTCTATCTC GTCGACGCCC GCCAGAGCCT GCACTTCCGG
CAGGTGTTCG CCGCCGCCCG CCGCGCCGGA TGGCTCGGCG ACGACGTCGA AGTCCGTCAC
GTCCCGTTCG GCACCGTCCT GGGTGCCGAC GGCAAACCGT TCAAGACCCG CTCCGGCGGC
ACCGTCGCGT TGACCAGTCT GCTGGACGCC GCCGTTGACG GCGCCCGTGC CGTCGTGGCC
GACAAGAACC CCGAGCTGCC CGCCGCCGAG TTGGACGCGA TCGCCGAAGC CGCCGGTATC
GGCGCCGTCA AGTACGCCGA CCTGTCCACC GCGCGCGGGA CCGACTATCG ATTCAATGTC
GACAAGATGG TGGCGCTCAA CGGCAACACC GGCGTCTACC TGCAGTACGC GCACACCCGT
ATCGCCTCCA TCCTCCGCAA GTCCCCCACC GGGACGCACG CGGCGGTGCA TGTGGACCTG
CCGCCACACC CGGCCGAGCG GGTCCTGGCA CTCCACCTCG ACGACTACTC GCGCGTCCTG
GCCGACACCG TCGAACAACT GGAACCGCAC CGCGTCGCGA CTTACCTGTT CGAGTTGGCG
AAACTGTTCA GCGCGTTCTA CGAGAACTGC CCCGTCCTGT CGGCGGCCGA CAGCGCCGTG
CGCGGCAACC GGCTCGCCCT GACCGAACTG GCCCGCCGGA CGCTGTCCCA CGGGTTGTGC
ATTCTGGGCA TCACCGCGTT GGAGCGGATG TGA
 
Protein sequence
MVAAIRRACP QPEQPDAMVR RSDHADFQTN GILPLAKQAG QQPRDLAVAV VDQLDHGDLL 
SEVTVASPGF VNITVTDAAV WRQVEQRLAD SLLGLGQPEA GSTTVVDYSA PNVAKQMHVG
HLRSTVIGDA LARLLEALGA TVIRQNHLGD WGTQFGMLIQ YLDEHPDLDW HRRGDHSPGI
DTLDALYRAA RAVFDTDTDF ADRSRKRVVA LQSGDAATVA VWRDLVRTSM EAFNAIYRRL
GVSLTDEHLA GESSYNPLLA DVVSALVEAG IAVESDGALC VFDDRFTGHE GQPIPLIVRK
RDGGFGYAAT DLATIRHRAQ DLGADRVLYL VDARQSLHFR QVFAAARRAG WLGDDVEVRH
VPFGTVLGAD GKPFKTRSGG TVALTSLLDA AVDGARAVVA DKNPELPAAE LDAIAEAAGI
GAVKYADLST ARGTDYRFNV DKMVALNGNT GVYLQYAHTR IASILRKSPT GTHAAVHVDL
PPHPAERVLA LHLDDYSRVL ADTVEQLEPH RVATYLFELA KLFSAFYENC PVLSAADSAV
RGNRLALTEL ARRTLSHGLC ILGITALERM