| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3264 |
|---|
| Symbol | |
|---|
| ID | 8884463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3449505 |
|---|
| End bp | 3450548 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_003512027 |
|---|
| Protein GI | 291300749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.111536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0493647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC CCGTACTCGC CGTCACGCTC GGCGACCCGG TGGGCATCGG CCCCGAGATC
ACCGCCCGCA CCCTGGCCGA GGTCGCCGGG GAGGACGGCC ACCACGGCAT CGCCGTGGGC
GACGCCGGAG CCCTGCGCCG AGGCGCCGCC GCCGCGGGTC TCGACGTGGA CGTGCGCGTG
GTAAACGATT TCTCGGTCGC TCCCGCCGGG CCTGGCACCA TCGACGTGTA CGACATCGGC
GTCCTGGGCG ACGCCGCCCC CGAATGGGGG ACAGTGGACC CCCGTGCCGG GAAGGCGGCA
GTGGTCGCCA TCGAGGTCGC CACCAAGGCC GCCATGGACC AACAGGTCGC GGGCATCGTC
ACCGGCCCCA TCAACAAGGA AGCCATCTGG GCCAGCGGAT CCACCCACCT GGGACACACC
GAGATGCTCG GCGAACTCAC CGGCGTCACC CGGCAGGACA CCATGTTCGT CGTCCGCGAC
CCGGCCGCCG ACGGCCACCA TCTGCGCATC TTCTTCACCA CCCGGCACGT GGCCCTGCGC
AAAGCCCTCG ACCAGCTCAC CCGCGACAGG GTCGGCGCCT CCATCCGGGA GGCACTGACG
GCACTAACGG TGTTCGGCAC CGAGAAGCCC CGGCTGGCCG TGGCGGCGGT CAACCCGCAC
GGCGGCGAGA ACGGCGCCTT CGGCGACGAG GAGATCGTCC ATATCGGACC GGCTTGTGAG
GACGCCCGCG CCGAGGGGCT GGACGTGACC GGCCCGGTAC CGGCCGACTC GGTGTTCCAC
CAGGGACTGT CGGGCCGCTT CGACGGCGTC CTGTCCCACT ACCACGACCA GGGGCACATC
GCCGCCAAGA CCTTCGACTT CAACGGCACC ATCTCGGTCA CCGTCGGACT GCCGATCCTG
CGCACCTCGG TCGACCACGG CACCGCCTTC GACATCGCCG GTTCCGGCAA GGCCGACCAC
GGCACCATGC TGTCCGCCTA CCGGGCCGGT GTCGACTACA GTCCGTACGT ACCAAGGATT
CGCTCAACCT ACGGTCGCCA GTAG
|
|---|
| Protein sequence | MNRPVLAVTL GDPVGIGPEI TARTLAEVAG EDGHHGIAVG DAGALRRGAA AAGLDVDVRV
VNDFSVAPAG PGTIDVYDIG VLGDAAPEWG TVDPRAGKAA VVAIEVATKA AMDQQVAGIV
TGPINKEAIW ASGSTHLGHT EMLGELTGVT RQDTMFVVRD PAADGHHLRI FFTTRHVALR
KALDQLTRDR VGASIREALT ALTVFGTEKP RLAVAAVNPH GGENGAFGDE EIVHIGPACE
DARAEGLDVT GPVPADSVFH QGLSGRFDGV LSHYHDQGHI AAKTFDFNGT ISVTVGLPIL
RTSVDHGTAF DIAGSGKADH GTMLSAYRAG VDYSPYVPRI RSTYGRQ
|
|---|
| |