| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3263 |
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| Symbol | |
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| ID | 8884462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3448144 |
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| End bp | 3449508 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003512026 |
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| Protein GI | 291300748 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.197433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0349209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAC CCCACGCGAT CCTCGTCATC GCCGACGACC TCACCGGCGC CAACGCCACC
GCCGCCGGAT TCGCCCGCGC CGGACTGCGC GCCGTCACCG TCGGCGCCGA CCAGCCCGGC
ACCGTCATCG CCGAGTTCAC CAACCGCTTC GACGCGGTCG TGGTGTGCAC CGACACCCGC
CACGCCCCAC CCGCTGAAGC CGCCGCCCGC GTCGAGGCCG CCATCGCCGC CGCACCACCG
GTACGGCTGG TGTGCAACCG CGTGGACTCC ACCCTGCGCG GCAACCTCGG CGCCTCCACC
GCCGCCGTCC TGCGCGCGGT GGCACGGCGC ACCGCCACAC CGACCGTGGC ACTGTTCCTG
CCCGCGCACC CGGCGGCCGG ACGCCAAACC GTCGAAGGCA ACCAGCTGCT GGACGGCGTC
CGGTTGGAGA ACACCGAACT GGCGCGCGAC CCCCGCACCC CGTTGCGCAC CTCCGACGTC
GCCGACCTGC TCACCCAGCA GGCCGCCCTA CGCATCGCCC ACATTCCACT GTCCCTGGTC
ACCGGCGACC CGGTACGGCT GCGCAAGGCC GTCGCCACCC GGGTGGCCGC TGGCGCCCAG
GTCATCATCG GCGACGCCCT CACCGTCGAA CACCTGCGCC GCGTCACCGA CGCCGCCGTC
GCCGCGGCAC CCGAGGTCGA ATGGGTCGGC GTCGACCCCG GCCCCGGCGC CGTGGAACTG
GCCCGCGCCA AGGGACTCAC CGGGCACGAC GACACCGCGC CACTGTTGGC TGTGTCCGGC
TCAGCCACCG CACTGACCCG CCAACAACTG GCGCGACTGC GCGAAACCCG GCCGGTGACC
GTGGTCCGTC CGGTGTATTC CGGCGACACG GTACTGCCCG ACCTCGAACC CACCGCCAAA
CAGCTCGCCG CCGCACTGGC ACAGGCCGAC TCCGGCGACA CCGTGCTGCT GGCCACCGCC
CTCGACGACG GTGACATCGT GGACATCGAC CCCGCCGACG CCGCCAGACT CCCCCAGCTG
CTGGCCGGAG CCGTCCGCCG CGCCCTGGCC GAACGAGCCG TCGGCGGACT GTTCGTCACC
GGCGGCGACG TGACCGCCGC GATGACCGCC GAACTGGGCG CCGCCGGCAT CGAGGTCGAA
CAGGAACTCG TCCCACTGGC GGTGGCCGGA TCCGTCGTCG GCGGAGACTG GGACGGACTG
CCCATCGTCA CCAAGGGCGG CCTGGTCGGC GACCCGGCCA CCACCGTCGA ATGCGTCGAC
CACCTGCGGC GCACCGTACA GGCCAACCGG CGCCGCGTCC GCGCGGCGGC GGTGGGACAC
CACGACCACA CGACCGGACG CACTGAACCA GGAGGAAGTT CATGA
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| Protein sequence | MTPPHAILVI ADDLTGANAT AAGFARAGLR AVTVGADQPG TVIAEFTNRF DAVVVCTDTR
HAPPAEAAAR VEAAIAAAPP VRLVCNRVDS TLRGNLGAST AAVLRAVARR TATPTVALFL
PAHPAAGRQT VEGNQLLDGV RLENTELARD PRTPLRTSDV ADLLTQQAAL RIAHIPLSLV
TGDPVRLRKA VATRVAAGAQ VIIGDALTVE HLRRVTDAAV AAAPEVEWVG VDPGPGAVEL
ARAKGLTGHD DTAPLLAVSG SATALTRQQL ARLRETRPVT VVRPVYSGDT VLPDLEPTAK
QLAAALAQAD SGDTVLLATA LDDGDIVDID PADAARLPQL LAGAVRRALA ERAVGGLFVT
GGDVTAAMTA ELGAAGIEVE QELVPLAVAG SVVGGDWDGL PIVTKGGLVG DPATTVECVD
HLRRTVQANR RRVRAAAVGH HDHTTGRTEP GGSS
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