| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3248 |
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| Symbol | |
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| ID | 8884447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3426388 |
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| End bp | 3428697 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | glycoside hydrolase family 3 domain-containing protein |
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| Protein accession | YP_003512011 |
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| Protein GI | 291300733 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00760548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0240048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG ACAACCGTTG GCACGACACG CGACTGTCCA TCCCCGAACG CGTCGAGGCC
CTGCTGGGTT CCATGACCGT GCCGGAGAAA CTCGCGCAGC TGGGCGCGTT CTGGCCGCCG
CATCCCGAAA CCGGTGACGG GGAGGTCGCG CCGATGGAGA ACGCCATGCG CACCGGGCCC
AAGACCCTGG ACGAAGCCGC CGAACACGGA CTGGGCCACC TCACCCGGCC GTTCGGCACC
CGGCCGATCC CGGCGCGCGC GGGGGCGTCC GAACTGGAGC AAACCCAGCG CCGCATCGTC
GACTCCACCC GGCTGGGCAT CCCCGCGATC GCCCACGAGG AATGCCTCAC CGGCTTCACC
ACCCTGGGCG CGACCGTCTA CCCGACGTCG CTGGCCTGGG CCGCCGCCTT CGACCCCGAC
CTGATCGAGG CCATGGCCGC TCGCATCGGC GCCGACATGC GCGCCGTGGG AGTCCACCAG
GGACTGTCGC CGGTCCTGGA CGTGGTGCGC GACTACCGGT GGGGCAGGGT CGAGGAGACC
ATGGGGGAGG ACCCGTACCT GGTGGCCGTC ACCGGCACCG CCTACGTGCG CGGCCTGCAA
GCGTGCGGGA TCATCGCCAC CCTCAAACAC TTCGCCGGGT ACTCCGCTTC CCGGGCCGCC
CGCAACCACG CCCCGGTCCC GATGGGCCCC AGGGAGTTCG CCGACGTCAT GCTGCCGCCG
TTCGAGATGG CGGTGCGGCT GGGCGGCGTC GGTTCGGTGA TGAACTCCTA CGCCGACGTC
GACGGCGTGC CCGCTGCCGT CAACCGGCGA CTGCTGACCG AGATCCTGCG CGACCGCTGG
GGTTTTCGCG GCACCGTCGT GTCCGACTAC TGGGCCGTGG CGTTCCTCGA TTTGACCCAC
CGGGTCACCG CCGACCGCGC CGACTCCGGT GTGCGCGCCA TCGAAGCCGG TGTCGACGTC
GAACTGCCCA CCGTCGACGC CTACCGGCTG CTGGCCGCCA AGCTCGCCAC CGGCGAACTC
GACGAGGCGA CAGTGGACAC CGCCGTGCGG CGGGTACTGA CCCACAAGGC CCAACTGGGT
CTGCTCGACG CCGAACCGCC GCTGGCCGCC CCCGAACCGG ACCGTGACCT CGACGGTCCC
GCCAACCGGG CGATGGCCGC CGAGGTCGCC GAGAAGTCGA TCGTCCTGTG CGCCAACGAT
GGCACGCTGC CGCTTTCGGC GACCACCAAA CGGATCGCGG TCATCGGCCC CACCGGGACC
GACCCGCGCA CCATGCTGGG CTGTTATTCC TTCCCCAACC ACGTGCTGTC GCGCTCCGGC
GAGACCGGCC TCGGCATCGA CGTGCCGACG CTCGCCGACG CCCTGCGGGC CGAGTTGCCC
GACGCCGAGA TCACCGCCGA GATAGGTGTA CCCATCCGCG AGGCCGACCG TTCCGGCATC
GCGGCGGCGG TCGCCGCGGC CCGGGCCGCC GAGGTGTGCG TCCTGGCCGT CGGCGACCTG
GCGAGCCTGT TCGGACGCGG CACCTCCGGC GAGGGCTGCG ACGTCAGCGA CCTGTCGCTG
CCCGGGATCC AGGCCGAACT GGTCGAGGCG GTGCTGGCCA CCGGCACCCC GACGGTCCTG
GTCGTCGTGT CGGGCCGCCC CTACGCCCTG GGGGCTTTCG CCGACCGCTG TGCCGCCGTC
GTGCAGGCGT TCCTGCCCGG CGAGGCGGGC GGGGCGGCCA TCGCCGGGAT CCTGTCCGGA
CGCGTCAACC CCAGCGGCCG TCTCCCGGTG GGCGTTCCCC GCGAGCCGGG CGGCATGCCC
GCCACCTACC TGGCACCGCC GCTGGGCCGC GACAGCCACG GCGTGTCCAA CCTGGACCCC
AGCCCGCTGT TCCCGTTCGG ACACGGCATC GGCTACACGA CCTTCGGCTA CGGCGCACTC
GAACTCGACA CCACCGCCAT CCCCACCACC GGACAGGTGA CCGCCGCCGT CACCGTCACC
AACACCGGCG ACCGTCACGG CACCGAGATC GTTCAGCTGT ACCTGTCCGA CGAGGTCGCG
CAGGTGACCC GCCCGGCGTT GCAGCTGGTC GGGTTCACCC GCGTCGACCT CGACGCGGGC
CAAATCCGCA CGGTCACCTT CACCCTGCAC GCCGAACGCA CCGCGTTCAC CAGCGTCGAC
CTGACCCGGA TCGTCGAGCC GGGCTGGTTC ACGCTCGCGG CGGGCGGATC CAGCGAGAAC
CTTCCCGCCG TCGCGCGTTT CGCGATCACC GGCCGCACCC GTGCGGTGGG CGACGACGCG
ATCCTGACGA CGCCGGTGGC CGTGACCTGA
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| Protein sequence | MADDNRWHDT RLSIPERVEA LLGSMTVPEK LAQLGAFWPP HPETGDGEVA PMENAMRTGP
KTLDEAAEHG LGHLTRPFGT RPIPARAGAS ELEQTQRRIV DSTRLGIPAI AHEECLTGFT
TLGATVYPTS LAWAAAFDPD LIEAMAARIG ADMRAVGVHQ GLSPVLDVVR DYRWGRVEET
MGEDPYLVAV TGTAYVRGLQ ACGIIATLKH FAGYSASRAA RNHAPVPMGP REFADVMLPP
FEMAVRLGGV GSVMNSYADV DGVPAAVNRR LLTEILRDRW GFRGTVVSDY WAVAFLDLTH
RVTADRADSG VRAIEAGVDV ELPTVDAYRL LAAKLATGEL DEATVDTAVR RVLTHKAQLG
LLDAEPPLAA PEPDRDLDGP ANRAMAAEVA EKSIVLCAND GTLPLSATTK RIAVIGPTGT
DPRTMLGCYS FPNHVLSRSG ETGLGIDVPT LADALRAELP DAEITAEIGV PIREADRSGI
AAAVAAARAA EVCVLAVGDL ASLFGRGTSG EGCDVSDLSL PGIQAELVEA VLATGTPTVL
VVVSGRPYAL GAFADRCAAV VQAFLPGEAG GAAIAGILSG RVNPSGRLPV GVPREPGGMP
ATYLAPPLGR DSHGVSNLDP SPLFPFGHGI GYTTFGYGAL ELDTTAIPTT GQVTAAVTVT
NTGDRHGTEI VQLYLSDEVA QVTRPALQLV GFTRVDLDAG QIRTVTFTLH AERTAFTSVD
LTRIVEPGWF TLAAGGSSEN LPAVARFAIT GRTRAVGDDA ILTTPVAVT
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