| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3229 |
|---|
| Symbol | |
|---|
| ID | 8884428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 3408962 |
|---|
| End bp | 3409909 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003511992 |
|---|
| Protein GI | 291300714 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0176714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000979467 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGCGAAAGC TACTCGGCTC ACTCACCCTG TGGAGCTCCA CCGGCCTGGT CGTCATGTGG
TCATCGGGCT TCATCGGCGC CGAACTGGGA ACCCGCGCCG CCCCCGCCGC CACCCTGCTG
GCCTGGCGGT TCGGCCTGGT CGGCCTCGCC GCGACGGTGT GGCTGTCGTG GCGGTGGCGC
CGCTTGGCCC CGCGCGACAT CGCCGTGCAC GCCCTCATCG GCGCCCTGTC CCAGGTCGGC
TACGTCTACG GCGTCGTACG CGCCGCCGAA CTGGGAGTCT CAGCCGGAAC CAGCGCCCTC
ATCGCGGCCC TGCAACCCAT CGTGGCCACC GCCACCGCGG CGGCCCTGCT GGGCGAGAAA
CTCGGGTGGC GCCTGATCGT GGGACTCGCG GTCGGTCTGG GCGGCACCGG TCTGGTCGTG
TCAGCCGACC TCAACTCGAG CGCGTCCGCG GTGTGGTGGG CTTATGCGAT CCCGGTGGCG
GCGATGCTGA GCCTGGTCGC CGGAACCGTG TACGAACGCC GCGCCCACCG TGGCCGCCAA
CCCGTCGCCA TGGCCGACGC CCTGGCGGTG CAGTTCGTGG TCAGCGGCCT GGCGTTCGTG
GCCATCGCCG CGGCCAGCGG CACCCTCATC CCCCCGGCGC GCGTCGAATT CTGGGTCGCG
GTGGCGTGGG TGATCGTGCT GTCCACCATC GGCGGCTACG GCTGCTATTG GACGGTCGTG
GCCCACGGCG GCGTCACCCG GGTCTCGGCA CTGCTGTACC TGACACCCCC GGCCACCGCC
ATATGGGCGT GGGCGATGTT CGGCCAACCG CTGACCGTGT TGTCGCTGGC CGGGATGGCG
GTGTCGGCCG CCGCGGTGGC ACTCATCCTC GCACCCTCCC GACGCCGCGC ACCCGCCCCC
GCGCCTCGAC GTGTCGAGAC GCCCCAATGC GAACCGGCCG CGACGTGA
|
|---|
| Protein sequence | MRKLLGSLTL WSSTGLVVMW SSGFIGAELG TRAAPAATLL AWRFGLVGLA ATVWLSWRWR
RLAPRDIAVH ALIGALSQVG YVYGVVRAAE LGVSAGTSAL IAALQPIVAT ATAAALLGEK
LGWRLIVGLA VGLGGTGLVV SADLNSSASA VWWAYAIPVA AMLSLVAGTV YERRAHRGRQ
PVAMADALAV QFVVSGLAFV AIAAASGTLI PPARVEFWVA VAWVIVLSTI GGYGCYWTVV
AHGGVTRVSA LLYLTPPATA IWAWAMFGQP LTVLSLAGMA VSAAAVALIL APSRRRAPAP
APRRVETPQC EPAAT
|
|---|
| |