Gene Snas_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3214 
Symbol 
ID8884413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3393081 
End bp3393695 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511977 
Protein GI291300699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000452216 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000474074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCA TCGACGCCAT CATCCTCGAA ACCCCCGACC CCGCCGCCGC CGAGGCGTTC 
TACGCCGCCG CGTTCGACCT GAAAGACCGG GTGCGCGCCA GCGCCTCGCA GGCACCCACG
TCCGGTTTCC GTGGCTACAC GATGTCCCTG GTGGTGGGCC AGCCCAGCAC CGTCGACAGT
CTCGTGGCCA CGGCACTGGC GGCCGGAGCC ACCACGCTCA AACCCGCCAA GAAGAGCTTT
TGGGGTTACG GCGCGGTCGT CCAGGACCCG TTCGGCACGA TCTGGAAGAT CGCCTCGTCG
TCGAAGAAGA ACACCGAACC CGACACGCGC CGCATCGACG AGATCGTGCT GCTGCTGGGC
GTGTCGGACG TGGCCGTCAC CAAACAGTTC TACGCCGACC AGGGCTTGAG CGTCGCCAAA
AGCTACGGCC GCAAGTACGT CGAGTTCGCC ACCGCGAACA TCAAACTCGC CCTGTACGGG
CGTCGTTTCG CCGCCAAGGA CGCCGGTGTC CCCATCGACG GGTCCGGCTC CCACCGGCTG
GTCATCGACT CCGACGCCGG AACCTTCACC GACCCCGACG GCTTCGCCTG GAACACCGCC
GTCGCCACCA ACTAA
 
Protein sequence
MTTIDAIILE TPDPAAAEAF YAAAFDLKDR VRASASQAPT SGFRGYTMSL VVGQPSTVDS 
LVATALAAGA TTLKPAKKSF WGYGAVVQDP FGTIWKIASS SKKNTEPDTR RIDEIVLLLG
VSDVAVTKQF YADQGLSVAK SYGRKYVEFA TANIKLALYG RRFAAKDAGV PIDGSGSHRL
VIDSDAGTFT DPDGFAWNTA VATN