Gene Snas_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3200 
Symbol 
ID8884399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3380205 
End bp3381170 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter ATPase subunit 
Protein accessionYP_003511963 
Protein GI291300685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000978488 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000199212 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGACGGGGT CGGTGGTGTC GGGTCGGGGT GTGGCGGTGC GGTACCGGAT CGGTAAGCGT 
GTCGCCAGGG CTGTTGACGA TGTCGATATC GATGTCGCGG GCGGTGAGGT GGTGGCGTTG
GCCGGGGAGT CGGGGTGCGG GAAGACGAGT CTGGCTAGGG CGTTGTTGGG GTTGGAGAAA
CCATCGGCGG GTGTGGTGTC GTGGCGGGGG GTGCCGTTGC GGTACGCGAC GAAGGCGCTT
AGGCCGTTTC ACGCGGATGT GCAGTTCGTG CCGCAGGATC CGGCGGGTGC GTTGAATCCG
CGGCACACGG TGTATGAGGC GGTCGCGGAG GGGTTGCGGA TTCATCGTCG CGGTGATGAG
GCCGCGAAGG TCGCCGAGGC GTTGGAGTGG GTGGGGTTGA CTCCGGCGAA ACGTTTCGCC
GACGCGTATC CCAGGCAGTT GTCGGGGGGT CAGAAGCAGC GGGTGTTGAT CGCGGGCGCG
TTGGTGTTGC GGCCCAGTCT GGTCATCGCC GATGAGCCGG TGGCGTCGTT GGACGCGTCG
GTGCGGGGCG AGATCCTGGC GTTGCTGTTG CGGCTGCGCG ACGATTTCGG GACCGCGTGC
CTGTTGGTGA CGCATGATCT GTCGGCGGCG TGGAGCATCA GCGACCGTAC CGCGATCATG
TACGCCGGGC GCATCGTCGA GACCGGGGCC ACGACGAGCG TGTTGACGGC TCCGTCGCAC
CCGTATACGA AGGCGTTGTT GTCGGTGTTG CCGGAGTCGG GGTGGGACGC GCCGGTGGTG
TTGCGCGGTG AACCGCCGGA TGCGACCGCG ATCGCCCCCG GCTGCCGGTT CCATCCGAGG
TGTCCGGCGT TGGCGGAGGG TGCCGCGGAG GCGGTGGCGG CGTCGTGCCG GGGCAAGGAG
TTGCCGGTGT TGCCCGCGTC GGGAGCGCAT GTGGCGTGCT ATCTGGACGA TTCCTGTCCC
GCCTGA
 
Protein sequence
MTGSVVSGRG VAVRYRIGKR VARAVDDVDI DVAGGEVVAL AGESGCGKTS LARALLGLEK 
PSAGVVSWRG VPLRYATKAL RPFHADVQFV PQDPAGALNP RHTVYEAVAE GLRIHRRGDE
AAKVAEALEW VGLTPAKRFA DAYPRQLSGG QKQRVLIAGA LVLRPSLVIA DEPVASLDAS
VRGEILALLL RLRDDFGTAC LLVTHDLSAA WSISDRTAIM YAGRIVETGA TTSVLTAPSH
PYTKALLSVL PESGWDAPVV LRGEPPDATA IAPGCRFHPR CPALAEGAAE AVAASCRGKE
LPVLPASGAH VACYLDDSCP A