| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3199 |
|---|
| Symbol | |
|---|
| ID | 8884398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3379249 |
|---|
| End bp | 3380208 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide/dipeptide ABC transporter ATPase subunit |
|---|
| Protein accession | YP_003511962 |
|---|
| Protein GI | 291300684 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000123373 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000185716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGTT TGGTGTTTGA GGACGTGCAT GTGACGTATC CGGGTGGGGT GCGGGCGGTG
CGGGGTGTGT CGTTGGAGGT GGCGTCGGGG CGTCGGGTGG GGGTGGCTGG GGAGTCGGGG
TGTGGGAAGT CGAGTGTGGC GTTGGCGGCG CTGCGACTGC TGCCCGCCAG CGCTGAGGTG
TCGGGGCGGA TTCTCATTGA TGATGAGGAT GTGGCGGGTA TGTCGTGGGG GCGGTTGCGG
GCGGTGCGGT GGACGGGGGC GTCGATCGTG TTTCAGGGGG CGATGCACGC GTTGAATCCG
GTGCGCACGG TCGGGCATCA GATCGCGGAG CCGTTGATCC TGCACGACAA GCTGTCGCCG
AAGGCGGCGG CGGGGCGGGT GGGTGGTTTG TTGGAGCGGG TGGGTTTGCC GGGGTGGCGG
GCGGGGTCGT TTCCGCATCA GTTGTCGGGT GGGCAGCGGC AGCGGGTGAT GATCGCGATG
GCGTTGGCGT GTCGTCCGGG GTTGATCATC GCCGATGAGG CCACGACGGC GTTGGATGTG
ATGATCGAGG CGCAGGTGTT GCGGTTGTTG GATCAGATCG TGGCCGATGA CCGAATCGCG
TTGTTGATGA TCAGTCATGA CGTGTCGGTG TTGTCGGCGT GGTGTGACGA GTTGGCGGTG
ATGTACGCGG GCCGCATTGT GGAGCATGGA CCGGCCAAAG CGGTGGTGCA GGCGCCGTCG
CATCCGTATG TGCGGGGTCT GGTGGGGGCT TTGTCGCCGG TGGGTGATGT GGGGGCGCGG
TTGTCGCCGC ATGGTCTGGC GGGGCGGGCT CCGGATCCGG CGGGGCTGCC GCGGGGGTGT
GCGTTTCGGG CGCGGTGTGA TGTGGCGGTC GAGGAGTGCG CGAGCCTGGA TGTTGGTTTG
CGTTCCAGTG GTGAGGGTCG GGTGGCGGCG TGTGTCCATG TCGGAGGTGA GTCGTCGTGA
|
|---|
| Protein sequence | MPGLVFEDVH VTYPGGVRAV RGVSLEVASG RRVGVAGESG CGKSSVALAA LRLLPASAEV
SGRILIDDED VAGMSWGRLR AVRWTGASIV FQGAMHALNP VRTVGHQIAE PLILHDKLSP
KAAAGRVGGL LERVGLPGWR AGSFPHQLSG GQRQRVMIAM ALACRPGLII ADEATTALDV
MIEAQVLRLL DQIVADDRIA LLMISHDVSV LSAWCDELAV MYAGRIVEHG PAKAVVQAPS
HPYVRGLVGA LSPVGDVGAR LSPHGLAGRA PDPAGLPRGC AFRARCDVAV EECASLDVGL
RSSGEGRVAA CVHVGGESS
|
|---|
| |