Gene Snas_3153 details

Gene Information

• Locus tag: Snas_3153
• ID: 8884352
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stackebrandtia nassauensis DSM 44728
• Kingdom: Bacteria
• Replicon accession: NC_013947
• Strand: +
• Start bp: 3329616
• End bp: 3332933
• Gene Length: 3318 bp
• Protein Length: 1105 aa
• Translation table: 11
• GC content: 69%
• Product: carbamoyl-phosphate synthase large subunit
• Protein accession: YP_003511917
• Protein GI: 291300639

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.00184389
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGCCTAAAC GCGACGACAT CCACCACGTC CTGGTCATCG GCTCCGGGCC GATCGTCATC 
GGCCAGGCCT GCGAATTCGA CTACTCCGGC ACCCAGGCGT GCCGGGTGCT CAAGGAGGAG 
GGGCTGCGCG TCAGCCTCGT CAACTCCAAC CCGGCCACCA TCATGACCGA TCCCGAGTTC 
GCCGACGCCA CCTATGTGGA ACCCATTACG CCGCAGTTCG TCGAGCAGGT CATCGCCGCC 
GAACGCCCCG ACGCGGTGCT GGCCACCCTG GGCGGCCAGA CCGCGCTCAA CACCGCGATC 
GCGTTGCACG AGAACGGCGT CCTGGAACGT TACGGTGTCG AACTCATCGG CGCCGACGTC 
GGCGCGATCC AGCGCGGCGA GGACCGGCAG CTGTTCAAGG AGGTCGTGGC CCGCGCCGGG 
GGAGAGGTCC CCGCCTCGGC GGTGTGCCAC ACCATGGACG AGGTCCACAA GACCGTCGCC 
GAGGTCGGCC TGCCGGTGGT GGTGCGGCCC AGCTTCACCA TGGGCGGCCT GGGTTCGGGC 
ATGGCCTACA CCCTCGACGA CGTCAACCGG ATGGCCTCGG CGGGACTGGC CGAGAGTCCC 
ACCTCCGAGG TCCTCATCGA GGAAAGCGTC CTGGGGTGGA AGGAATACGA ACTGGAGCTG 
ATGCGCGACC GCAACGACAA CGTGGTCGTG GTGTGCTCCA TCGAGAACAT CGACCCGATG 
GGCGTGCACA CCGGCGACTC GGTGACCGTG GCGCCGTCGA TGACGTTGAC CGACGTGGAG 
TTCCAGCGGT TGCGTGACCT GGGCATCGCG GTGCTGCGCG AGGTCGGCGT CGACACCGGC 
GGCTGCAACA TCCAGTTCGC CGTCAACCCC GCCAACGGGC GCATCGTCGT CATCGAGATG 
AACCCGCGGG TGTCGCGGTC GTCGGCGCTG GCCTCCAAGG CCACCGGTTT TCCGATCGCG 
AAGATCGCCG CCCGGCTGGC CATCGGCTAC ACACTCGACG AGATCCCCAA CGACATCACC 
CGGGCCACGC CCGCCGCCTT CGAACCGGCA CTGGACTACG TGGTCGTCAA GATCCCGAGG 
TTCGCGTTCG AGAAGTTCCC CGGCGCCGAC GCCACGTTGA CCACCACCAT GAAGTCGGTG 
GGGGAGGCGA TGGCCATCGG CCGCACCTTC TCCGAGGCCC TCAACAAGGC GATGCGCTCC 
ACCGAGACCA AGATGGCGGG CCTGTGGACC CGTCCCGACC CGGAGAACGT CGGTCTGGAG 
GCCACGCTGG AGTCGCTGCG GTTCGGCCAC GACGGCCGCC TGTACGCGGC CGAGCGGGCG 
TTGCGGCAGG GTTCGAGCGT CGCCAAGGTC TGCGAGGTCT CCGGCATCGA CCCGTGGTTC 
GTCGACCAGC TGGCCGGTCT GACCGAGCTG CGCGCCGAAC TGGTCGAGGC CCCGGCCCTG 
GACGCGTCGC TGCTGCGGCG CGCCAAACGC GCCGGGCTGT CGGACCAGCA GCTGGCCGCG 
CTGCGGCCGG AGTTCGCCGG TGAGAACGGC ATCCGACGCC TGCGGCACCG GCTGGGTCTG 
CGTCCGGTGT ACAAGACCGT CGACACCTGC GCGGGCGAGT TCGCCGCCGA GACCCCCTAC 
CATTACTCGT CCTATGAGGA CGAGACGGAG GTGCGGCCCA GCGACCGTCC CAAGGTGATG 
ATCCTGGGCT CGGGCCCCAA CCGCATCGGG CAGGGCATCG AGTTCGACTA CTCGTGCGTG 
CACGCGGCCA CCGCGCTGCG CGAGGCCGGT TTCGAGACCG TCATGGTCAA CTGCAACCCC 
GAGACCGTCT CCACCGACTA CGACACCGCC GACCGGCTGT ACTTCGAGCC GTTGACGCTG 
GAGGACGTCC TGGAGATCCA CCACGCCGAG CACTCCTCCG GCCTGGCCGC CGGTGGTCCC 
GGCGTCGTGG GTGTCGTGGT GCAGTTGGGC GGTCAGACGC CGCTGGGCCT GGCCGCCGAC 
CTGACCGCGG CGGGCCTGCC GGTGGTGGGC ACCCCGGCCG ACTCGATCCA CCTGGCCGAG 
GACCGGGGTG CGTTCGGCAA GATCCTGGCC AAGGCCGGGC TGCCCGCGCC CAAGCACGGC 
ACCGCCTCCA CCTACGCCGA GGCCAAGACC ATCGCCGCCG ACATCGGCTA TCCCGTCCTG 
GTGCGGCCGT CCTATGTGCT TGGCGGCCGG GGCATGGAGA TCGTGTACGA CGACGCGAAA 
CTGCAGTCGT ACATCACCCG CGCCACCGAC ATCAGCCCCG CCCACCCGGT GCTGGTCGAC 
CGGTTCCTCG ACGACGCCAT CGAGATCGAC GTCGACGCCC TGTGCGACGG CACCGAGGTC 
TACCTGGGCG GCGTCATGGA ACACATCGAG GAAGCCGGAG TCCACTCCGG AGACTCCTCG 
TGCGCGCTGC CGCCGATCAC GCTCGGCTCC GGCACCCTGG CCGCGATCCG CTCCCACACC 
GAGGCACTGG CCGACGGCAT CGGGGTGCGC GGCCTGCTCA ACGTCCAGTA CGCCCTCAAG 
GACGACGTCC TGTACGTGCT GGAGGCCAAC CCGCGCGCCA GCCGCACGGT GCCGTTCGTG 
TCCAAGGCGA CCGGGATACC GCTGGCCAAG GCCGCCACCC GCATCATGAT GGGCGCGTCC 
ATCGCCGCGC TGCGCGCCGA GGGCCTGTTG CCGGCGGAAG GCGACGGCGG CAACACGCCA 
CCCGAGGCAC CGATTGCCGT GAAGGAGGCG GTGCTGCCGT TCAAACGGTT CCGCACCACC 
GAGGGCCACG GCATCGACGC CCTGCTGGGC CCGGAGATGA AGTCCACCGG CGAGGTCATG 
GGCATCGACA CCGGTTTCGG CCACGCCTTC GCCAAGGCCC AGGCCGCCAC CTACGGCAAG 
GTGCCCACCT CCGGCAAGGT GTTCGTGTCG GTGGCCGACC GCGACAAACG CGCCGTGGTG 
TTCCCGGTGA AACGCCTGGT CGACCTGGGT TTCACCGTCT ACGCCACCCG CGGCACCGGT 
GACGTGCTGC GCCGCCACGG CATCGAGTTC ACTCCGGTGC GGCGCCACAC CGACCCCGAT 
CCGGACCTGT CGCTTCGCGA CACCGTCGAA CTGATCGGCT CCGGGGAACT GGCGCTGGTC 
ATCAACACCC CGGCCGGGTC CACCGGGGTG CGCACCGACG GCTACGAGAT CCGCAGTGCC 
GCCGTCGTGG TCGACACGCC CTGCATCACG ACGATTCAGG GGGCGGCAGC GGCGGTCATG 
GGGATAGAGG CCATCATGCG TGGGGATCTA ACCGTGCGGC CCCTGCAGGA GCTGCACGCG 
GCGCTCAACA AGGAATAG 

 

Protein sequence

MPKRDDIHHV LVIGSGPIVI GQACEFDYSG TQACRVLKEE GLRVSLVNSN PATIMTDPEF 
ADATYVEPIT PQFVEQVIAA ERPDAVLATL GGQTALNTAI ALHENGVLER YGVELIGADV 
GAIQRGEDRQ LFKEVVARAG GEVPASAVCH TMDEVHKTVA EVGLPVVVRP SFTMGGLGSG 
MAYTLDDVNR MASAGLAESP TSEVLIEESV LGWKEYELEL MRDRNDNVVV VCSIENIDPM 
GVHTGDSVTV APSMTLTDVE FQRLRDLGIA VLREVGVDTG GCNIQFAVNP ANGRIVVIEM 
NPRVSRSSAL ASKATGFPIA KIAARLAIGY TLDEIPNDIT RATPAAFEPA LDYVVVKIPR 
FAFEKFPGAD ATLTTTMKSV GEAMAIGRTF SEALNKAMRS TETKMAGLWT RPDPENVGLE 
ATLESLRFGH DGRLYAAERA LRQGSSVAKV CEVSGIDPWF VDQLAGLTEL RAELVEAPAL 
DASLLRRAKR AGLSDQQLAA LRPEFAGENG IRRLRHRLGL RPVYKTVDTC AGEFAAETPY 
HYSSYEDETE VRPSDRPKVM ILGSGPNRIG QGIEFDYSCV HAATALREAG FETVMVNCNP 
ETVSTDYDTA DRLYFEPLTL EDVLEIHHAE HSSGLAAGGP GVVGVVVQLG GQTPLGLAAD 
LTAAGLPVVG TPADSIHLAE DRGAFGKILA KAGLPAPKHG TASTYAEAKT IAADIGYPVL 
VRPSYVLGGR GMEIVYDDAK LQSYITRATD ISPAHPVLVD RFLDDAIEID VDALCDGTEV 
YLGGVMEHIE EAGVHSGDSS CALPPITLGS GTLAAIRSHT EALADGIGVR GLLNVQYALK 
DDVLYVLEAN PRASRTVPFV SKATGIPLAK AATRIMMGAS IAALRAEGLL PAEGDGGNTP 
PEAPIAVKEA VLPFKRFRTT EGHGIDALLG PEMKSTGEVM GIDTGFGHAF AKAQAATYGK 
VPTSGKVFVS VADRDKRAVV FPVKRLVDLG FTVYATRGTG DVLRRHGIEF TPVRRHTDPD 
PDLSLRDTVE LIGSGELALV INTPAGSTGV RTDGYEIRSA AVVVDTPCIT TIQGAAAAVM 
GIEAIMRGDL TVRPLQELHA ALNKE