Gene Snas_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3146 
Symbol 
ID8884345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3323877 
End bp3324320 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNusB antitermination factor 
Protein accessionYP_003511910 
Protein GI291300632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00121302 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGGACA ACGCTTTGGC GGGTTTCCCC GCCCGCCGCA AAGCCCGCAA GCGTGCCGTC 
GACGTCCTTT ACGAGGCCGA GCAGCGTGAC GAGCCGATCC GCCGGGTGCT GGAGGACCGT
CGCAAGCTGG CGGTGACCGA CCCGCAGATG CCCGGCATCC CGGAGTACAC CTTCGAGTTG
GTCGACGGTG TCGCGGAGTA CCTGGACGAG GTCGACGACG TCATCGCGCG GTGCCTGCAC
TCGGGCTGGT ACCTGGACCG CATCGCCGCC GTCGACCGCA ACATCCTGCG GGTGGCCGCC
TTCGAGCTGC GCTACCGCGA GGACGTGGAC GCGGCGGTGG CCATCAGTGA GGCCGTCAAG
ATCGCCGAGG TGCTGTGCGG CGAGGACTCG CCCGCGTTCG TCAACGGCGT GCTGCAGAGT
GTCTCGGAGC TGGAGAAGAA GTAG
 
Protein sequence
MSDNALAGFP ARRKARKRAV DVLYEAEQRD EPIRRVLEDR RKLAVTDPQM PGIPEYTFEL 
VDGVAEYLDE VDDVIARCLH SGWYLDRIAA VDRNILRVAA FELRYREDVD AAVAISEAVK
IAEVLCGEDS PAFVNGVLQS VSELEKK