Gene Snas_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3140 
Symbol 
ID8884339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3317903 
End bp3318304 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content68% 
IMG OID 
Productproteinase inhibitor I16 subtilisin-type inhibitor 
Protein accessionYP_003511904 
Protein GI291300626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.48366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00609959 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAAAA CGATCCTGCG ACTCACAGGG ATCACCATCG CCGCGGCCGG GCTCGTCGGT 
CTGACCGCGA CCGCCGCTGG AGCCCACGAG GCTTCCCAGA TCGGCGGTTC CTACCACCTC
ACGATCCGCG ACAACGACGG TGAACGGGCC GCCGCCACTC TCACCTGCTA CCCGCACGGC
GGCAGCCACC CCCGCCCCTA CGAGGCTTGC GCACAGCTGG AAGCCGTCGG GGGCAACGTC
ACCGCCATGT CCGAGGACCC CGGACCCTGC ACGATGATGT GGGACCCGGT CACGGTCCGG
TCGGAAGGCC TGTGGGGCAA CACGTACAGC ACCTACGAAG AGACGTTCGC GAACCAGTGC
GTCGCCGTGC GCGAGACCGG CGGCGTCCTG TTCGACTTCT AG
 
Protein sequence
MSKTILRLTG ITIAAAGLVG LTATAAGAHE ASQIGGSYHL TIRDNDGERA AATLTCYPHG 
GSHPRPYEAC AQLEAVGGNV TAMSEDPGPC TMMWDPVTVR SEGLWGNTYS TYEETFANQC
VAVRETGGVL FDF