Gene Snas_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3128 
Symbol 
ID8884327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3303856 
End bp3304683 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003511892 
Protein GI291300614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.404447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00266425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACA CCGCCCGCAT GACCGCCCGG GGCCTTAAGA AACGCTACGG GCACGTCACC 
GCCCTCGACG GCACCGACTT CGACCTGCGC GCCGGTGAGG TGCTGGCCGT CATCGGCGAC
AACGGCGCCG GGAAGTCCAC ACTCATCAAA GCGCTGTCGG GAGCCATCGC CCCCGACGCC
GGGACGATCA CCCTGGACGG CGAGCCGGTC AGGTTCCGCA CCCCCGCCGA CGCCCGCGCC
AACGGCATCG AGACCGTCTA CCAGGATCTG GCCCTGGCAC CGGCGCTGGA CATCGCCACC
AACATGTTCA TGGGCCGCGA ACTGCGGCGC AAGGGCCCGC TGGGCAGCGT GTTCCGGTTG
CTCGACAAGA AGCGGATGCG GCAGCAGGCC GCCCAGCACA TGAGCGAACT CCAGATCGGA
CTGCAGAGCC TCACGCACCC GGTGGAGGAC CTGTCCGGCG GCCAGCGGCA GGGTGTCGCG
GTGGCGCGGG CGGCGGCCTG GGCCGAGCAC GTGGTCATCA TGGACGAACC CACCGCGGCC
CTGGGCGTGA AGGAGTCGGC GCAGGTGCTG GACCTGATCG GCAGGGTCCG GGACCGGGGT
CTGGCGGTCG TGCTGATCAG CCACAACATG CCGCACGTGT TCGAGATCGC CGACCGCATC
CACATCCAGC GGCTCGGCAA GCGCGTCGCC CTCGTCGGAC GCGAGGACCA CTCGATGTCC
GAAGTGGTCG CGATCATGAC CGGCGCGCTG CGGGTCAGCG ACGACGACGG GGAGGCCACC
GAGGTCGTCG ACCAGGCCGC GGCAGCCGCG GCGGGCCTGG ACACCTGA
 
Protein sequence
MTDTARMTAR GLKKRYGHVT ALDGTDFDLR AGEVLAVIGD NGAGKSTLIK ALSGAIAPDA 
GTITLDGEPV RFRTPADARA NGIETVYQDL ALAPALDIAT NMFMGRELRR KGPLGSVFRL
LDKKRMRQQA AQHMSELQIG LQSLTHPVED LSGGQRQGVA VARAAAWAEH VVIMDEPTAA
LGVKESAQVL DLIGRVRDRG LAVVLISHNM PHVFEIADRI HIQRLGKRVA LVGREDHSMS
EVVAIMTGAL RVSDDDGEAT EVVDQAAAAA AGLDT