Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3128 |
Symbol | |
ID | 8884327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3303856 |
End bp | 3304683 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003511892 |
Protein GI | 291300614 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.404447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00266425 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGACA CCGCCCGCAT GACCGCCCGG GGCCTTAAGA AACGCTACGG GCACGTCACC GCCCTCGACG GCACCGACTT CGACCTGCGC GCCGGTGAGG TGCTGGCCGT CATCGGCGAC AACGGCGCCG GGAAGTCCAC ACTCATCAAA GCGCTGTCGG GAGCCATCGC CCCCGACGCC GGGACGATCA CCCTGGACGG CGAGCCGGTC AGGTTCCGCA CCCCCGCCGA CGCCCGCGCC AACGGCATCG AGACCGTCTA CCAGGATCTG GCCCTGGCAC CGGCGCTGGA CATCGCCACC AACATGTTCA TGGGCCGCGA ACTGCGGCGC AAGGGCCCGC TGGGCAGCGT GTTCCGGTTG CTCGACAAGA AGCGGATGCG GCAGCAGGCC GCCCAGCACA TGAGCGAACT CCAGATCGGA CTGCAGAGCC TCACGCACCC GGTGGAGGAC CTGTCCGGCG GCCAGCGGCA GGGTGTCGCG GTGGCGCGGG CGGCGGCCTG GGCCGAGCAC GTGGTCATCA TGGACGAACC CACCGCGGCC CTGGGCGTGA AGGAGTCGGC GCAGGTGCTG GACCTGATCG GCAGGGTCCG GGACCGGGGT CTGGCGGTCG TGCTGATCAG CCACAACATG CCGCACGTGT TCGAGATCGC CGACCGCATC CACATCCAGC GGCTCGGCAA GCGCGTCGCC CTCGTCGGAC GCGAGGACCA CTCGATGTCC GAAGTGGTCG CGATCATGAC CGGCGCGCTG CGGGTCAGCG ACGACGACGG GGAGGCCACC GAGGTCGTCG ACCAGGCCGC GGCAGCCGCG GCGGGCCTGG ACACCTGA
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Protein sequence | MTDTARMTAR GLKKRYGHVT ALDGTDFDLR AGEVLAVIGD NGAGKSTLIK ALSGAIAPDA GTITLDGEPV RFRTPADARA NGIETVYQDL ALAPALDIAT NMFMGRELRR KGPLGSVFRL LDKKRMRQQA AQHMSELQIG LQSLTHPVED LSGGQRQGVA VARAAAWAEH VVIMDEPTAA LGVKESAQVL DLIGRVRDRG LAVVLISHNM PHVFEIADRI HIQRLGKRVA LVGREDHSMS EVVAIMTGAL RVSDDDGEAT EVVDQAAAAA AGLDT
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