| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3123 |
|---|
| Symbol | |
|---|
| ID | 8884322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3297796 |
|---|
| End bp | 3298620 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003511887 |
|---|
| Protein GI | 291300609 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.610741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000350702 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTG ACCGTGCCCA ACCCCGGGCC CCGATCACCT GGCTGTCCAT CGTGGGCTAC
CTGCTGGCGC TCGTGACCGC GCTGCCCATC CTGTGGATGG TGCTGGCCGC CTTCCGCCCC
AAGGGCGACG TGTTCGCGCT GACCTGGCCG ACAAACCTGA CCACCGAGAA CTTCACCTAC
GTGCTGACCG AGGTCCCGTT CCCGGTCTAC CTCGGCAACA GCGCCCTGGT GTCCATCGTG
GTCACCGTGA TCGCGCTGTT CCTGCACACC ATGGCCGGAT ACGCGCTGGC CCGGTTGCGG
TTCCCCGGCC GGGGCCTGGC CTTCGGTCTG GTGATCGCGA CGCTGTTGAT CTCGCTGCCG
GTGATCCTGG TGCCGCTGTT CATGGTGACC GAGGTACTGG GCATGGTGAA CACCTACGCG
GGCCTGATCG TGCCCAGCAT CTTCAACGCC TTCGGCGTGT TCCTGTTGCG GCAGTTCTAC
CTCAGCCTTC CCACCGACCT GGAGGACGCC GGTCGCCTGG ACGGCTGCGG CCACCTGCGG
CTGTACTGGC ACATCGTGCT GCCGTTGAGC CGCCCCATCA TGGCGTCGCT GGCGGTGCTG
TTCTTCCTGG CGAACTGGAA CTCCTTCGTG TGGCCGCTGA CCGTGGCCCA GGACGAGAAC
CTGCGCGTCG TGCAGGTCGG GATCAACTCG CTGCAAGGAC AATATGGACA GGACTACCAG
TACGTGCTGG CCGGGTCGGT CCTGGCCGCG ATCCCGACGG TGATCGTGTT CCTCATCGGA
CAACGCAGGA TCGTCGACTC ACTGAAGACA ACCGGATTGA AATAG
|
|---|
| Protein sequence | MTRDRAQPRA PITWLSIVGY LLALVTALPI LWMVLAAFRP KGDVFALTWP TNLTTENFTY
VLTEVPFPVY LGNSALVSIV VTVIALFLHT MAGYALARLR FPGRGLAFGL VIATLLISLP
VILVPLFMVT EVLGMVNTYA GLIVPSIFNA FGVFLLRQFY LSLPTDLEDA GRLDGCGHLR
LYWHIVLPLS RPIMASLAVL FFLANWNSFV WPLTVAQDEN LRVVQVGINS LQGQYGQDYQ
YVLAGSVLAA IPTVIVFLIG QRRIVDSLKT TGLK
|
|---|
| |