| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3114 |
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| Symbol | |
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| ID | 8884313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3287254 |
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| End bp | 3289704 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003511878 |
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| Protein GI | 291300600 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.122668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0357376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCGT CGGCGACCCA GGTGCGCCTG GGAATCGATT TCGGGACCTC CAACACCATC
GCGGTCATGG AACGTCCTGG CCTTCCGGCT ACCCCGCTGC TGTTCGACGG TTCCCCGGTG
CTGCCCTCGG CCGTGTTCGC CACCGAAGGC AAACTGCTGG TCGGCCGCGA CGCCGAGCGC
GCCGCCATGT CCGACCCCGC CAGCTTCGAA CCGCACCCCA AGCGCTGCAT CGCCGACACC
ACCGTCCTGC TGGGACAGCG GGAGTTCAAG GCCGTCGACC TGGCCGCCGC CGTGCTGGCC
CGCGTCGCCG CCGAGGCCCA GCGGGTTGCG GGCGTCATGC CCGGCACCGT GGTGCTCACC
CACCCGGCGG GCTGGGCCAA CGAGCGGCTG AAGCTGCTGA GCACCGCCGC CTACCAGGCC
GGACTGCCGC CGCCGCGCTT CGCCTCCGAA CCGGTCGCGG CGGCCACCCA CTTCGTCACC
CACCTGGGCC ACACCTTCCC CGACGGCAGC CACATCGTCG TCTACGACCT GGGCGGCGGC
ACCTTCGACG TCAGCGTGGT CCGGATGGCG GGGGACAACC TCGAGGTCAC CGCGACCGGT
GGCCTGCCCG ACGTGGGCGG CGTCGACATC GACTTCGCGA TCGTGCGGCA CCTGGAACAG
ACCTACCCGG GCGAGGACGG CCAGTGGCGG CGGCTGCGCG AACCCGAAAG CCCCGCCGAC
CGTCGGCACC GCCGGGGCCT GTGGCGGGAC GTGCGCGACG CCAAGGAGAT CCTCAGCCGC
GAGTCCAACT CGGCCCTGTT CATCCCGGTC CTGGACGTCG ACGCGCACCT GACCCGCGAG
GAACTCGACA CCCTGGCCCG CCCGCTGCTG GCCGAGACCG TCGCGCTCAC CATGGACGTC
CTGGCCGGAG CCAAGATCGG CATGGACAAG GTCGCGGGCC TGTTCCTGGT GGGCGGCGCC
AGCCGGATGC CGCTGTCGTC GACCCTGCTG ATGCGCGAGA CCCGGATCGC GCCCACCGTC
CTGGAACAAC CCGAACTCGT GGTGGCCAGC GGCGCCATCG ACGCGCCGGG CCGCGAATCC
CACGCGAGCC CCGACGGCTC GCCGACCATG ATCGCCGCCC TGCCGCCGGT CGTGGTGGAA
CCGCCGCCGC GTCCGGTGTA CCGGGGCGTG GCCAAGGTCC CGACGCGCCC GGCGATCACC
CCCGAATCCG AGGTGCTGGC GCAAGCGGTT GTCTCCGTCG ACCTCCCCGC CGAAGCCGCG
GCACCGCAGG TCGCGGCCGC ACCGCCGGTT CCGCAGCAGC GCCCCGCCGA AGCCGACGGC
ACCGCCGCGC CCCTGGCCTC GGCCACGCCC TCGATCCCGC AGCCGCACCC CGCGGACGCC
ACTGGCACCG CCGCGCCGCT GGCCGCGGCG ATGGCGGCTC CGTCCGGTGT GGCCACCGCC
GAACCCGAAG CGGCCCTGCG ACAGCCGTCG CCGACGGCCG CCGTGCCCGC CGCCCAGGCC
GGGCCGCCCT CGACCGCGAT CCCCGCCACC GCACCGCCGC CCCCGGCACC CATGACCACC
ACTCCGGCCG AAGGCCCCGT GCTGGCGCTT GCGCATGCCC GCGAGGGCCG TCTGGCCGTC
GCCCGACCCG ACAGCGTCAC CGTCTCCACG GTGTCCGGCA CCGCGCCCAG CGTCGTACTG
CGCGACCACG ACGGCCCGGT CGTCGGCGTG CGCTGGTCCA CCGAAGCCCC CGGCCTACTG
GCCGTCGGCT CCGGCAACAC CGTCACGCTG TGGCGCGACA ACGACAACGC CTTCGCATCC
ACGCGCACCA TCGCCTGCCC CGACGAGGTG AAACAGCTGA GCTGGTCGGC CACCGGCCTG
GCCACCGCGA CCGGTACCGA GATCCTGGTG TGGGACCCCG CGACGGGGGA GTGCTCCCGC
ACCTGGCGCT TCAGCTCCGG CCCCGAAGGC GAACCGCTGC GGGCGCTGGT GTGGAACCAC
GCGGGCGACC GGCTGGCGGC CGGTGGCTCA CTGGGCACCA TCAAGGTGTG GCGCACCGGC
GAGGACAGCC CGTCCACAGT GCTCAACTGC GCGCCGGTCG GCGTGCGCAC GTTGGCGTTC
TCTCCCGACG GGGACTGGCT GGTGTCCGGC GACGCCGCCG GCGGCCTGCG CATCTGGCGG
CTGAGCGACT CCAGCGACCA GCACCTCAAA CAGGCCCACG AGGCGGCGGT TCAGACCGTT
GCCTGGTCAC CGGACGGGAA ACTCATCGCC TCGGGTGGCA TCGACAGCCG GGTCCGCTTG
TGGGACGCCG GATCGGGCCG CGAACACCGC GTCGGCGAAG GCCATACCGG CACCGTGAAC
ACCCTGTGCT GGAGCACCGA CGGCAACCGC GTCATCTCCG GTTCCTCCGA CGGCACCGTC
CGGCAATGGA CCGCCGCCAC CGGCGCCGAA CTGCCCGAAC GGCTCGGCTG A
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| Protein sequence | MSASATQVRL GIDFGTSNTI AVMERPGLPA TPLLFDGSPV LPSAVFATEG KLLVGRDAER
AAMSDPASFE PHPKRCIADT TVLLGQREFK AVDLAAAVLA RVAAEAQRVA GVMPGTVVLT
HPAGWANERL KLLSTAAYQA GLPPPRFASE PVAAATHFVT HLGHTFPDGS HIVVYDLGGG
TFDVSVVRMA GDNLEVTATG GLPDVGGVDI DFAIVRHLEQ TYPGEDGQWR RLREPESPAD
RRHRRGLWRD VRDAKEILSR ESNSALFIPV LDVDAHLTRE ELDTLARPLL AETVALTMDV
LAGAKIGMDK VAGLFLVGGA SRMPLSSTLL MRETRIAPTV LEQPELVVAS GAIDAPGRES
HASPDGSPTM IAALPPVVVE PPPRPVYRGV AKVPTRPAIT PESEVLAQAV VSVDLPAEAA
APQVAAAPPV PQQRPAEADG TAAPLASATP SIPQPHPADA TGTAAPLAAA MAAPSGVATA
EPEAALRQPS PTAAVPAAQA GPPSTAIPAT APPPPAPMTT TPAEGPVLAL AHAREGRLAV
ARPDSVTVST VSGTAPSVVL RDHDGPVVGV RWSTEAPGLL AVGSGNTVTL WRDNDNAFAS
TRTIACPDEV KQLSWSATGL ATATGTEILV WDPATGECSR TWRFSSGPEG EPLRALVWNH
AGDRLAAGGS LGTIKVWRTG EDSPSTVLNC APVGVRTLAF SPDGDWLVSG DAAGGLRIWR
LSDSSDQHLK QAHEAAVQTV AWSPDGKLIA SGGIDSRVRL WDAGSGREHR VGEGHTGTVN
TLCWSTDGNR VISGSSDGTV RQWTAATGAE LPERLG
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