Gene Snas_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3113 
Symbol 
ID8884312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3285135 
End bp3286997 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content69% 
IMG OID 
ProductGTP-binding protein TypA 
Protein accessionYP_003511877 
Protein GI291300599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.218846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0515982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC GCACTGACCT GCGCAATGTC GCGATCATCG CCCACGTCGA CCACGGGAAG 
ACCACTCTGG TCGACGCCAT GCTGCGCCAG GCCGGTGCCT TCCGCCCCGG CGCGGACGTG
GACGACCGGG TCATGGACTC CATGGACCTG GAACGGGAAA AGGGCATCAC CATCCTGGCC
AAGAACACCG CCGTGCACCA TCACACGCCC GACGGCCAGG AACTGACCAT CAACATCATC
GACACCCCCG GCCACGCCGA CTTCGGCGGT GAGGTCGAAC GCGGCCTGAC CATGGTCGAC
GGGGTGCTGC TGCTGGTGGA CGCGTCCGAG GGACCGCTGC CGCAGACCCG GTTCGTGCTG
CGCAAGGCGC TGGCGGCGAA ACTGCCGATC GTCCTGGTCA TCAACAAGGT CGACCGGCCC
GACGCCCGCA TCAAGGAGGT CGTCGACGAG GTCTACGAGC TGTTCCTCGA CCTGGACGCC
GACGAGACCC AGATCGACTT CCCGATCGTG TACGCCTGTG CCCGCGACGG CATCGCCTCG
CTGTCGGAAC CCGGCAACGG TCAGGTGCCC GCCGATTCGA CGAACCTGCA GCCGCTGGTC
CAGACGCTGC TGGACACCGT CCCCGCGCCG ACCTTCGACG AAGGCGCGCC GTTGCAGGCG
CACGTCACCA ACCTGGACGC GTCCCCGTTC CTGGGACGGC TGGCGCTGTG CCGGGTGCGG
CAGGGAACGA TCCACAAGGG TGAGACCGTG GCCTGGTGCC GCACCGACGG GACCGTCGCC
AAGGTGCGGG TCTCGGAGCT GCTCATGACC GAGGGCCTGG AGCGCAAGCC CGCCGCCGAG
GCCGGCCCGG GCGACATCAT CGCCGTGGCC GGTATCCCCG AGATCATGAT CGGCGAGACC
CTCGCCCACG CCGAACACCC CGAGCCGCTG CCACTGATCC GGGTGGACGA ACCGGCGATC
TCCATGACCA TCGGCACCAA CACCTCGCCG CTGACCGGGA AGGTCAAGGG CGCCAAGGTG
ACCGCCCGTC AGCTCAAGGA CCGCCTGGAC CGGGAGCTGA TCGGCAACGT GTCGCTGCGG
GTGCTGCCCA CCGAGCGTCC CGACGCCTGG GAGGTGCAGG GCCGTGGCGA ACTGGCGCTG
GCGATCCTGG TCGAGCAGAT GCGGCGCGAG AGCTTCGAGC TGACCGTCGG CAAGCCGCAG
GTCGTCACGC GTGAGATCGA CGGCAAGACC TGCGAACCGG TGGAACGGCT GACCATCGAC
GCCCCCGACG AGTACCTGGG CGCGATCACG CAGCTGCTGG CCACCCGCAA GGGCCGGATG
GAGCAGCTGG TCAACCACGG CACCGGCTGG ATCCGGATGG AGTGGCTGAT CCCGGCGCGC
GGCCTGATCG GCTTCCGCAC CGAGTTCCTG ACCGAGACCC GCGGCACCGG TATCGCCCAC
CACGTCTTCG AAAGCTACGA GCCGTGGTTC GGGGAGCTGC GCACCCGTCC GTCGGGTTCG
CTGGTCGCCG ACCGCTCCGG GGTCGCGGCG AGCTACGCCA TGTTCAACCT GCAGGAACGC
GGCACCCTGT TCGTGGAACC GACCACCGAG GTCTACGAGG GCATGATCGT GGGCGAGAAC
TCGCGCGCCG ACGACATGGA CGTCAACATC TGCAAGGAGA AGAAGCTCAC CAACGTCCGG
CAGTCCACGG GCGAGGAGCT GGAGCGTCTG GTACCGCCGC GCAAGCTGTC GCTGGAGCAG
GCGCTGGAGT TCTGCCGTGG CGACGAGTGC GTCGAGGTGA CCCCGGAGGC GATCCGGATC
CGCAAGGTCG AGCTGGACGC GAAGCTGCGC GAGCGTTCCC GCCGCACCGG CGCGCCCCGC
TAG
 
Protein sequence
MSKRTDLRNV AIIAHVDHGK TTLVDAMLRQ AGAFRPGADV DDRVMDSMDL EREKGITILA 
KNTAVHHHTP DGQELTINII DTPGHADFGG EVERGLTMVD GVLLLVDASE GPLPQTRFVL
RKALAAKLPI VLVINKVDRP DARIKEVVDE VYELFLDLDA DETQIDFPIV YACARDGIAS
LSEPGNGQVP ADSTNLQPLV QTLLDTVPAP TFDEGAPLQA HVTNLDASPF LGRLALCRVR
QGTIHKGETV AWCRTDGTVA KVRVSELLMT EGLERKPAAE AGPGDIIAVA GIPEIMIGET
LAHAEHPEPL PLIRVDEPAI SMTIGTNTSP LTGKVKGAKV TARQLKDRLD RELIGNVSLR
VLPTERPDAW EVQGRGELAL AILVEQMRRE SFELTVGKPQ VVTREIDGKT CEPVERLTID
APDEYLGAIT QLLATRKGRM EQLVNHGTGW IRMEWLIPAR GLIGFRTEFL TETRGTGIAH
HVFESYEPWF GELRTRPSGS LVADRSGVAA SYAMFNLQER GTLFVEPTTE VYEGMIVGEN
SRADDMDVNI CKEKKLTNVR QSTGEELERL VPPRKLSLEQ ALEFCRGDEC VEVTPEAIRI
RKVELDAKLR ERSRRTGAPR