Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3113 |
Symbol | |
ID | 8884312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3285135 |
End bp | 3286997 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | GTP-binding protein TypA |
Protein accession | YP_003511877 |
Protein GI | 291300599 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.218846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0515982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC GCACTGACCT GCGCAATGTC GCGATCATCG CCCACGTCGA CCACGGGAAG ACCACTCTGG TCGACGCCAT GCTGCGCCAG GCCGGTGCCT TCCGCCCCGG CGCGGACGTG GACGACCGGG TCATGGACTC CATGGACCTG GAACGGGAAA AGGGCATCAC CATCCTGGCC AAGAACACCG CCGTGCACCA TCACACGCCC GACGGCCAGG AACTGACCAT CAACATCATC GACACCCCCG GCCACGCCGA CTTCGGCGGT GAGGTCGAAC GCGGCCTGAC CATGGTCGAC GGGGTGCTGC TGCTGGTGGA CGCGTCCGAG GGACCGCTGC CGCAGACCCG GTTCGTGCTG CGCAAGGCGC TGGCGGCGAA ACTGCCGATC GTCCTGGTCA TCAACAAGGT CGACCGGCCC GACGCCCGCA TCAAGGAGGT CGTCGACGAG GTCTACGAGC TGTTCCTCGA CCTGGACGCC GACGAGACCC AGATCGACTT CCCGATCGTG TACGCCTGTG CCCGCGACGG CATCGCCTCG CTGTCGGAAC CCGGCAACGG TCAGGTGCCC GCCGATTCGA CGAACCTGCA GCCGCTGGTC CAGACGCTGC TGGACACCGT CCCCGCGCCG ACCTTCGACG AAGGCGCGCC GTTGCAGGCG CACGTCACCA ACCTGGACGC GTCCCCGTTC CTGGGACGGC TGGCGCTGTG CCGGGTGCGG CAGGGAACGA TCCACAAGGG TGAGACCGTG GCCTGGTGCC GCACCGACGG GACCGTCGCC AAGGTGCGGG TCTCGGAGCT GCTCATGACC GAGGGCCTGG AGCGCAAGCC CGCCGCCGAG GCCGGCCCGG GCGACATCAT CGCCGTGGCC GGTATCCCCG AGATCATGAT CGGCGAGACC CTCGCCCACG CCGAACACCC CGAGCCGCTG CCACTGATCC GGGTGGACGA ACCGGCGATC TCCATGACCA TCGGCACCAA CACCTCGCCG CTGACCGGGA AGGTCAAGGG CGCCAAGGTG ACCGCCCGTC AGCTCAAGGA CCGCCTGGAC CGGGAGCTGA TCGGCAACGT GTCGCTGCGG GTGCTGCCCA CCGAGCGTCC CGACGCCTGG GAGGTGCAGG GCCGTGGCGA ACTGGCGCTG GCGATCCTGG TCGAGCAGAT GCGGCGCGAG AGCTTCGAGC TGACCGTCGG CAAGCCGCAG GTCGTCACGC GTGAGATCGA CGGCAAGACC TGCGAACCGG TGGAACGGCT GACCATCGAC GCCCCCGACG AGTACCTGGG CGCGATCACG CAGCTGCTGG CCACCCGCAA GGGCCGGATG GAGCAGCTGG TCAACCACGG CACCGGCTGG ATCCGGATGG AGTGGCTGAT CCCGGCGCGC GGCCTGATCG GCTTCCGCAC CGAGTTCCTG ACCGAGACCC GCGGCACCGG TATCGCCCAC CACGTCTTCG AAAGCTACGA GCCGTGGTTC GGGGAGCTGC GCACCCGTCC GTCGGGTTCG CTGGTCGCCG ACCGCTCCGG GGTCGCGGCG AGCTACGCCA TGTTCAACCT GCAGGAACGC GGCACCCTGT TCGTGGAACC GACCACCGAG GTCTACGAGG GCATGATCGT GGGCGAGAAC TCGCGCGCCG ACGACATGGA CGTCAACATC TGCAAGGAGA AGAAGCTCAC CAACGTCCGG CAGTCCACGG GCGAGGAGCT GGAGCGTCTG GTACCGCCGC GCAAGCTGTC GCTGGAGCAG GCGCTGGAGT TCTGCCGTGG CGACGAGTGC GTCGAGGTGA CCCCGGAGGC GATCCGGATC CGCAAGGTCG AGCTGGACGC GAAGCTGCGC GAGCGTTCCC GCCGCACCGG CGCGCCCCGC TAG
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Protein sequence | MSKRTDLRNV AIIAHVDHGK TTLVDAMLRQ AGAFRPGADV DDRVMDSMDL EREKGITILA KNTAVHHHTP DGQELTINII DTPGHADFGG EVERGLTMVD GVLLLVDASE GPLPQTRFVL RKALAAKLPI VLVINKVDRP DARIKEVVDE VYELFLDLDA DETQIDFPIV YACARDGIAS LSEPGNGQVP ADSTNLQPLV QTLLDTVPAP TFDEGAPLQA HVTNLDASPF LGRLALCRVR QGTIHKGETV AWCRTDGTVA KVRVSELLMT EGLERKPAAE AGPGDIIAVA GIPEIMIGET LAHAEHPEPL PLIRVDEPAI SMTIGTNTSP LTGKVKGAKV TARQLKDRLD RELIGNVSLR VLPTERPDAW EVQGRGELAL AILVEQMRRE SFELTVGKPQ VVTREIDGKT CEPVERLTID APDEYLGAIT QLLATRKGRM EQLVNHGTGW IRMEWLIPAR GLIGFRTEFL TETRGTGIAH HVFESYEPWF GELRTRPSGS LVADRSGVAA SYAMFNLQER GTLFVEPTTE VYEGMIVGEN SRADDMDVNI CKEKKLTNVR QSTGEELERL VPPRKLSLEQ ALEFCRGDEC VEVTPEAIRI RKVELDAKLR ERSRRTGAPR
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