Gene Snas_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3109 
Symbol 
ID8884308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3280729 
End bp3281595 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511873 
Protein GI291300595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.625315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.507317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TGCGTTTCGG CCTGCGGCAC CTGGCCGCGA TACTGGGCCT GACCGTCGCC 
GCGTTGCCAC CGGTCGTCCT CGCCGACGCC CCGGCCGCGC ACGCGGCGGT GTGCTCGCCG
GGCTCGGGCG TCAGCGTCAT CGTCGACTTC GGAGCACTTG GGTCGGTGAA GTCCGGTTGC
GCGTCCGGGG CACCGTCCAC CGGCCTGAAA GCCTTGAGCG GTGCGGGTTT CAGCTACAGC
TACGTACCCG GCCAGACCGG GATGGTCTGC CGCATCAACA GCCTGCCCGA CCCGTGCCCC
TCGGGCGGCC CGCCGGTGGA CAAGTACTGG TCCTACTGGG TCGCCGAGCG CGGCGGCACC
TGGAAGTACA GCTCAAAGGG CGCCGGGAAC CGCACCCCAC CCGTGGGCAG TGTGGACGGT
TGGGCCTTCG GTGCCGGGAA ACCGCCCGCG ACGGCGCCGC CCGCCAAGGG ATCCTCCTCG
GGCGGTGGCG GCGACAGCGA CGGCGGTGGC GACGGTTCCG GTGACGGCGG CGGCAGTGGC
GGTGGCGGAA AGGACGACGG CGGCTCGAAG AAGTCCGGCA AGCCCGGCGA CCCCTCGGCG
TCCGACAAGA AGAAGGACCG CGACTCGCCC TCGGCCAGCG GCTCGGGCAG CCAGACCGCG
CCCGGCGCCG AGGATCCGGC GGCGGACCCC GGTTCGGGCT CCGATGGCTA CGACAACGCG
TCCAACGTGG GCTCCCAGAT GGGCACGGTC GGCGGCATCT TCGGTGCCGG GATCGTGCTG
GTGCTGCTGG CGGCACTGGG CTGGCGCACC TGGCAACGCC GACGCGGCGA AACGGAGCCG
GTCGAAGCGG CGGAACCGTC CGAATGA
 
Protein sequence
MTRMRFGLRH LAAILGLTVA ALPPVVLADA PAAHAAVCSP GSGVSVIVDF GALGSVKSGC 
ASGAPSTGLK ALSGAGFSYS YVPGQTGMVC RINSLPDPCP SGGPPVDKYW SYWVAERGGT
WKYSSKGAGN RTPPVGSVDG WAFGAGKPPA TAPPAKGSSS GGGGDSDGGG DGSGDGGGSG
GGGKDDGGSK KSGKPGDPSA SDKKKDRDSP SASGSGSQTA PGAEDPAADP GSGSDGYDNA
SNVGSQMGTV GGIFGAGIVL VLLAALGWRT WQRRRGETEP VEAAEPSE