Gene Snas_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3103 
Symbol 
ID8884302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3274286 
End bp3274897 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511867 
Protein GI291300589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.531887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.721362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGT CGGCGTCGCC CCGACGCCGC GGCCGGGCAC CGCTGGGACC GAGAATATTC 
GGCGGCGGTG CCCTGCTCGT TGGCGCACTG GCATTCACCC TTGCCCTCTC CGACCTGAAC
GAGGGCCGGG ACGCCGAGTT CACCCCGGTG AACGCGGCCT TCGCACCACT GATCATCACC
GGTCTGTGGG TGCTGTTCGC GGCGATCTAC TTCGTCAAAC AGCTGATCAA CCCGTACGCC
GACTACCCCG AGTTCGCCGA GGAACCCCCA CCGGCGCGCA CCGACGACGC CTACCCCGAG
CCGGACGGCG ATGACGGTGA ACCCAAGCCG GACGGCGAAC CCGACGCCGA CCAGGCCGAC
GCCCACCCCG CCGACGTGCA GTGGAAACCA GCCGCACTGG TCGCCGTCGC GCTGATGGTC
TACGTGCTGC TGCTGGACAC GGTCGGCTTC GTGCTCCTGA CACCGCTGTT CTTCGTCGCC
ATCACCTGGA TCTTCGGCAG CCGCAAGATC ATCCGCGACG TGATCGTCGC GGTCGTGTTG
ACCGTCGGTA CCTACCTGCT GTTCACCTCG GTGCTCGGCC TGACCCTCGC GGAAGGACTG
TTCGCGCCAT GA
 
Protein sequence
MEKSASPRRR GRAPLGPRIF GGGALLVGAL AFTLALSDLN EGRDAEFTPV NAAFAPLIIT 
GLWVLFAAIY FVKQLINPYA DYPEFAEEPP PARTDDAYPE PDGDDGEPKP DGEPDADQAD
AHPADVQWKP AALVAVALMV YVLLLDTVGF VLLTPLFFVA ITWIFGSRKI IRDVIVAVVL
TVGTYLLFTS VLGLTLAEGL FAP