Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3100 |
Symbol | |
ID | 8884299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3271812 |
End bp | 3272600 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, SARP family |
Protein accession | YP_003511864 |
Protein GI | 291300586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.534297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.565651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACATTC GATTGCTCGG TTCGGTCGAA GTGCGCGTCG GCGACGTGTC CGTGGCACTG GGAGGGCCGA AACAGGCAGG ACTGTTCACT TTAATAGCGC TGCACCGCAA CGAGACGGTG AGCATCGACC GGATCGTGGA GGCCACCTGG CAGGGCGCCC CGCCCTCGGG TGTACGCGGC CAGATCCAGG TCTACGTGTC CAATCTGCGC CGTGCCCTGG CCGAGGCCGG AGGCGACCGG GACCGGATCC AGACCCGCCG CAGCGGCTAC ACGCTGTGCG CCGAGGCCGA GGAGATCGAC CTGGCCCGGT TCGAGGCACT GACCGCCGAG GCCCGCGAAG CGTTGCGGCA GGGCCGTCTC GACACCGCCT CGGCGCTGTT GCGCGACGCG CTGGCACTGT GGCGCGGCGA CGCGTTCGAG GACATCCGGG TGGGCTTCGC CGAGGCCGAG GCGGCCCGGC TCGAGGCCAT GCGACTGGCG GCGCTGGGTA CCCGCTTGAT CGTCGACCTG GCGCTGGGAC GCTGCGCCGA GGTCGCCGCC GAGTCCCAGG CCCTGGTTCG CACCTACCCT CTCCATGAGG GACTGTGGGC GCGGCTTATG CTTGCGCTGC ACTGCGACGG CCGCTCGGCC GAAGCCCTCG ACACCTACCG CCGCGCCCGC ACCGTCCTGA GGTCACAGGT CGGCATGGAG CCCGGCCCCG AACTTCGCAA CGTCGCCAGT CTGGTGTGGA ACGGTGAGCC CGGTGAGGCT CAGATCGCCC GCTGGACCGG CGCGTTGGCG GGGGTGTGA
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Protein sequence | MDIRLLGSVE VRVGDVSVAL GGPKQAGLFT LIALHRNETV SIDRIVEATW QGAPPSGVRG QIQVYVSNLR RALAEAGGDR DRIQTRRSGY TLCAEAEEID LARFEALTAE AREALRQGRL DTASALLRDA LALWRGDAFE DIRVGFAEAE AARLEAMRLA ALGTRLIVDL ALGRCAEVAA ESQALVRTYP LHEGLWARLM LALHCDGRSA EALDTYRRAR TVLRSQVGME PGPELRNVAS LVWNGEPGEA QIARWTGALA GV
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