Gene Snas_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3100 
Symbol 
ID8884299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3271812 
End bp3272600 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, SARP family 
Protein accessionYP_003511864 
Protein GI291300586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.534297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.565651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATTC GATTGCTCGG TTCGGTCGAA GTGCGCGTCG GCGACGTGTC CGTGGCACTG 
GGAGGGCCGA AACAGGCAGG ACTGTTCACT TTAATAGCGC TGCACCGCAA CGAGACGGTG
AGCATCGACC GGATCGTGGA GGCCACCTGG CAGGGCGCCC CGCCCTCGGG TGTACGCGGC
CAGATCCAGG TCTACGTGTC CAATCTGCGC CGTGCCCTGG CCGAGGCCGG AGGCGACCGG
GACCGGATCC AGACCCGCCG CAGCGGCTAC ACGCTGTGCG CCGAGGCCGA GGAGATCGAC
CTGGCCCGGT TCGAGGCACT GACCGCCGAG GCCCGCGAAG CGTTGCGGCA GGGCCGTCTC
GACACCGCCT CGGCGCTGTT GCGCGACGCG CTGGCACTGT GGCGCGGCGA CGCGTTCGAG
GACATCCGGG TGGGCTTCGC CGAGGCCGAG GCGGCCCGGC TCGAGGCCAT GCGACTGGCG
GCGCTGGGTA CCCGCTTGAT CGTCGACCTG GCGCTGGGAC GCTGCGCCGA GGTCGCCGCC
GAGTCCCAGG CCCTGGTTCG CACCTACCCT CTCCATGAGG GACTGTGGGC GCGGCTTATG
CTTGCGCTGC ACTGCGACGG CCGCTCGGCC GAAGCCCTCG ACACCTACCG CCGCGCCCGC
ACCGTCCTGA GGTCACAGGT CGGCATGGAG CCCGGCCCCG AACTTCGCAA CGTCGCCAGT
CTGGTGTGGA ACGGTGAGCC CGGTGAGGCT CAGATCGCCC GCTGGACCGG CGCGTTGGCG
GGGGTGTGA
 
Protein sequence
MDIRLLGSVE VRVGDVSVAL GGPKQAGLFT LIALHRNETV SIDRIVEATW QGAPPSGVRG 
QIQVYVSNLR RALAEAGGDR DRIQTRRSGY TLCAEAEEID LARFEALTAE AREALRQGRL
DTASALLRDA LALWRGDAFE DIRVGFAEAE AARLEAMRLA ALGTRLIVDL ALGRCAEVAA
ESQALVRTYP LHEGLWARLM LALHCDGRSA EALDTYRRAR TVLRSQVGME PGPELRNVAS
LVWNGEPGEA QIARWTGALA GV