Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3096 |
Symbol | |
ID | 8884295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3267997 |
End bp | 3269733 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_003511860 |
Protein GI | 291300582 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACG ACGAATCTCG CGTCCTGAAT GACCCGGTGC CGCGGACGGT AGCCGATACC CTCTCCGGAC TTCGCCTCAA CGAGCTGCTC GCCGAGGTGC AGGAACGGAT CGGACAGATC GCCGCCACCC GCGACCGGTT GCAGCGTCTC CTGGACGCCA TCACGATGGT GGCCGGGGAC CTCGACCTGG ACTCGACGCT GCGCCGCATC ACCGAGGCCG CCGTCGGGCT CGTCGACGCC CGCTACGGTG CGCTGGGCGT GCTCGCCGCG CCCGGAGACC GCAACCGGCT GCGCAGCTTC GTCACCGTCG GCATGAGCGA GGACGAACGG TCCCATATCG ACCACGAGCC GCACGGTGAG GGCATCCTGG GGCTGCTCAT CAACCACCCG CAGGTCATCC GGTTGTCGGC GCTCAACAAG CACCCCGACT CGGTGGGATT CCCCGCCAAC CATCCCAAGA TGGCCAGCTT CCTGGGTGCC CCGATCCAGG TGCGCGACGA GGTGTTCGGC AACCTCTACC TGTCGGAGAA GCGCGGCGCC TCGGAGTTCA ACAGCGACGA CGAGGTCGTC ATCCAGGCGC TGGCCGCCGC GGCGGGTATC GCCATCGAGA ACGCCCGCAT GTACGAGCAG GCCACGGTGC GGCGGCGCTG GCTGGCCGCC TCGTCCAAAC TCCAGGCCGA ACTGCTCAGC GGCGCCACCC TGGAGTCGGC GCTGGGGCTG GCGGCCGTGC ACACCCGGGA ACTGCTCAAG GCCGACACCG TCTTCATCGC GCTGCCGGAG CCCTACGAGG ACGACCTGCT GCGCGTCAAG GCCGTGGACG GCGACTTCGA CGACCGGCTC ATGGGCATCA CGCTGACCGC GCCGGTGATG AGCGAAGTGC TCAAGGCCGG TGTCAGCGAG GTCGAGGGCG AGTTCGCCGC CCTGCTGGCC GCCGCCGCCA AGACCCCGCC GGGGGAGTTC GCGGCGGTGC TGGCGGTGCC GATCCAGATC TCCGACACCG GGGAGGGCAC GCTGGTGGCG TTGCGGCACC GGGGATCGCC GCTGTTCTCG TCACTGAAAC TGCCCGACGT GGTGTCCTTC GCGCAGGACG CGGCGCTGGC GATCCGCGCC GCCGAGGGCC AACGCGCCCA GCACCTGCTG GACGTGCTGT CGGACCGCGA GCGCATCGCC GCCGACCTGC ACGACCACGT CATCCAGCGG CTGTACGGCT GCGGCATGAA CCTGCAGGCG ACCCTGCCCA GGGTCAACGA ACCCGGGGCC CGGCGCCGGA TCCAGACCGT CGTGGAGGAA CTGGACACCA CGATCCGCGA GATCCGCACC TCGATCTTCG CGCTCCAGTC CACCAGCGAG GACTCCAGCG GCAGCCTGCG ACGGCGACTG CTGGACGCGA CCGCGCAGAT GTCGGCCGAC AGCAAACTCT CCCCGGCGGT GTACCTGTCG GGCGCCGTGG ACACGCTGGT GCCGGTGGAG ATCGCCGACC ACGCCGAGGC CGTGGTGCGC GAGGCCGTCA GCAACGCCGT GCGCCACGCC CACGCCAGTC ACATCGTCGT CAGCGCCGAG GCCGGGGACG ACCTGGTCAT CGACGTCACC GACGATGGTA AGGGCATCCC GGAGGAGGTC GTGCACAGTG GCCTGGCCAA TATGGAGCGG CGAGCGCAGA CCTGCGGCGG CAACCTGACG ATCGCGCCGA TGCCCGAAGG CGGCACCCGG ATCACCTGGC AGGTCCCGCT GCCGTGA
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Protein sequence | MPDDESRVLN DPVPRTVADT LSGLRLNELL AEVQERIGQI AATRDRLQRL LDAITMVAGD LDLDSTLRRI TEAAVGLVDA RYGALGVLAA PGDRNRLRSF VTVGMSEDER SHIDHEPHGE GILGLLINHP QVIRLSALNK HPDSVGFPAN HPKMASFLGA PIQVRDEVFG NLYLSEKRGA SEFNSDDEVV IQALAAAAGI AIENARMYEQ ATVRRRWLAA SSKLQAELLS GATLESALGL AAVHTRELLK ADTVFIALPE PYEDDLLRVK AVDGDFDDRL MGITLTAPVM SEVLKAGVSE VEGEFAALLA AAAKTPPGEF AAVLAVPIQI SDTGEGTLVA LRHRGSPLFS SLKLPDVVSF AQDAALAIRA AEGQRAQHLL DVLSDRERIA ADLHDHVIQR LYGCGMNLQA TLPRVNEPGA RRRIQTVVEE LDTTIREIRT SIFALQSTSE DSSGSLRRRL LDATAQMSAD SKLSPAVYLS GAVDTLVPVE IADHAEAVVR EAVSNAVRHA HASHIVVSAE AGDDLVIDVT DDGKGIPEEV VHSGLANMER RAQTCGGNLT IAPMPEGGTR ITWQVPLP
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