| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3090 |
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| Symbol | |
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| ID | 8884289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3259934 |
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| End bp | 3262660 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | putative signal transduction protein with Nacht domain |
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| Protein accession | YP_003511854 |
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| Protein GI | 291300576 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.624689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.76371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATG GAACCAAAGG ATTCGCGGTC GTGGCGCTGG CCGCCCTGGC AGTCCCGGCG
GGGGTCGGCG GTGTCCTCAA GAACGCGGTG GCGTCCAACC CGCTGACCGC GGTGCTGTTC
CTCATCATCT ACTGGCTGCT GCTGGCGGTG GCGGCCCTGG TGTCGACGGC GGCGCGCGGG
CCGCTGCAAC GCCGGGCGGC GCAGCTGGGC GACTGGGTCG ACGCCGTGCT GGGACGCAGG
TTCTCCCGCT ACGCCCGCCA GTACCGGCAT CACATGCTGT CGGTCAACCG GTGGGTCGAC
TTCAAGGGTC TGAGCATTGT GGGCGACCAT ACGCCCGAAC TGGACGCGGT GTTCGTAGAC
GTGTCGGTGG AGAGCGCCCC GGTCGACCGG GTTCCCGGCG GCCTCGTCGA CGGCGGCACC
GGCACAAGGG ACGGTTCCCG GCACTCGATC CACAAGTTCC TGGACGGCAG GAAGGGCGGA
GTACTGGCCG TCATCGGCGG CCCCGGCTGC GGCAAGACCA CGCTGCTGCG GCACCTGGCC
CGCGACACCG CACGCGACAA GACCAACCGG CGCCGGATCC CGGTGTTCCT GGCCCTGAGC
CGACTGTCCA CACCCATCAA CGACGAGCCG AGCCTGCCGC AGCTCTTGCG CATCCGGCCG
CCGGAACTGC GGGTCCCCGA ACCGAAGGGC TGGTGGGAAC AGCAACTGCA CCAGGGCAAC
TGTCTGGTGC TCATGGACGG TCTGGACGAG GTCGCCGACA ACCAGGACCG GCGCAAGGTC
GCCGAGTGGA TCGGCGACCA GGTGGCGGCC TTCCCCGACA ACGACTTCGT CATCACCTCC
CGGCCCGGCG GTTACGGGCA GGCACCCATC GAGGGCGCAC GGGTGCTGGC GGTGCAGCCG
TTCAGCCGGG AACAGATCGA GCGGTTCCTG CGCGGCTGGT ACCTGGCCAC CGAACGCGAG
GCCACCGGCG TCGACGACTC CGGAGTGGAC GCCATCGCCG CGGAGAAGGC CAACGACCTC
ATCGACCGGC TCAAGGACGC GCCCGGCCTG GACGAGCTGA CCGCCAATCC GTTGCTGCTG
ACCATGATCG CGCTGGTGCA CCGGTACCGC AGCGCGCTGC CACGGGGTCG CGCCGACCTG
TACGAGGAGA TCTGCCGGGC GATGCTGTGG AGCCGCCACG AGGCCCGGGG CGTGACGGTG
GCGCTGTCGG GCGAGGCGAA GTGGGAGGTA CTGGCCCAGC TGGCCTTCAA CCTGATGAAG
TCGCGGCTGC GCGAGATCAA GGGCTCCGAC GTACCGCCGA TGATCGAGGA CGCGCTGGAG
GCGAGTCTGC CGGGCACCGA GTCCGAACAG TTCCTGCGCG AGGTGTGCGG CAACGGCCTG
CTGGTGGAGA TGGAACGCGG CGTCTACGCG TTCGCGCACC AGACGATCGG GGAGTACCTG
GCCGCCAAGC ACATCATCGA CTGCGGCATC GAGGACGAAC TGGTCACCTT CGTCGACGAC
GTGTGGTGGG CCGAGACGCT GGAGCTGTAC GCCGCCTGCG CCCGCTCCAT CGACAAGCTC
GTGGAAGCCT GTCTGCGCAA GGGAACCGAG GGCGCGATCG CGCAGGCTTT CACGTGCGCC
AACTACGGCG GCCGCCTGGA GCGGCGACTG CGGGACCGGT TGCGGCGGCT GGAGGAGCAG
GCGTTCACGC CCCGCGCGGA CCCGGCGGTG CGCCGGGCCG TGGCCCGGGC GCTGGTGTCG
CGACACCTGA GCAGACTGAA GCGGCTGAGC GACAGCGACT TCTACTGTCC ACAACCGATC
ACCGAGGACC TGTACTGGCT GTTCCGCTGC GCGACCGGCG ACGGCGACAC CGCCAGCCGC
AACCCCGACG GCGAGCACGC GGTGGGCGGG CTGTGGCCCG CCGACGTGAA GAACTTCGTC
GACTGGATCA ACACCATCGG CCGCTACAGC GACCGCACCG ACTCCCCGTT CCGGTTGCCG
CGCCGCGACG AGGTGGAACT CATCCGGGGC TCGGGCGGTC TCGACGAAAC CGCTTCGCTT
CAGGCCACGG CGCCGATCTG GCGCGCCACC GCCCGGGGAC CGGAACTGCC GTACACCGTG
ACCGGCGAGG AACTGATCGC GGCCGTCACC GCCGACATCG AGGAGACCGG TCTGTGGATT
CCGGCCCGGA TGGCCTTGGC CGCCAACCGG GTCACCGCCG GGGCCGCACC GGATCTGGCG
TCCTATCACG ACACGCTGGC GCCGGAGTTC GGTTGGCTGC CCGGCGACGC GGCGATCTTC
TCCGAGACCG ACAGCGGCTG GGTGAACGAC CTGGTGGACC GGCTGCTGTC CGAGTCCGAC
GGTGAGGCGG CGTCGGTCTT CGCCGAGATC CTGGCCATCC GGGCCGGGGT CTGGGACACC
GAGGGAATCG CGACCGTCGT CAGCTCGCCG TCCCCGGCCC CGCGACAGTC CGACGGCTCG
GCTGACTCGG CCAGCCCGCT GCCGTGGCAC GACGCCGCCA GCCGCAGCCT CGCCGACCGG
GCCCGCACCG CGTTCGCGCG CAAACCGCCG CCCGAATCGC CGTGGCTGCT GCGACTGCCC
GCGCTGCTGC TGGCGGCTGA GTTCAACGCC AGCCGCAACG ACCTCAACCG CGACGCCTGC
CTCGGCATCG CCGCCACGCT CACGTTCCGG GAATGCCGCG CCCGCGACGA CTACCCCGGC
GAGGCCCTGA TCCTGGTGCG GGACTGA
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| Protein sequence | MSHGTKGFAV VALAALAVPA GVGGVLKNAV ASNPLTAVLF LIIYWLLLAV AALVSTAARG
PLQRRAAQLG DWVDAVLGRR FSRYARQYRH HMLSVNRWVD FKGLSIVGDH TPELDAVFVD
VSVESAPVDR VPGGLVDGGT GTRDGSRHSI HKFLDGRKGG VLAVIGGPGC GKTTLLRHLA
RDTARDKTNR RRIPVFLALS RLSTPINDEP SLPQLLRIRP PELRVPEPKG WWEQQLHQGN
CLVLMDGLDE VADNQDRRKV AEWIGDQVAA FPDNDFVITS RPGGYGQAPI EGARVLAVQP
FSREQIERFL RGWYLATERE ATGVDDSGVD AIAAEKANDL IDRLKDAPGL DELTANPLLL
TMIALVHRYR SALPRGRADL YEEICRAMLW SRHEARGVTV ALSGEAKWEV LAQLAFNLMK
SRLREIKGSD VPPMIEDALE ASLPGTESEQ FLREVCGNGL LVEMERGVYA FAHQTIGEYL
AAKHIIDCGI EDELVTFVDD VWWAETLELY AACARSIDKL VEACLRKGTE GAIAQAFTCA
NYGGRLERRL RDRLRRLEEQ AFTPRADPAV RRAVARALVS RHLSRLKRLS DSDFYCPQPI
TEDLYWLFRC ATGDGDTASR NPDGEHAVGG LWPADVKNFV DWINTIGRYS DRTDSPFRLP
RRDEVELIRG SGGLDETASL QATAPIWRAT ARGPELPYTV TGEELIAAVT ADIEETGLWI
PARMALAANR VTAGAAPDLA SYHDTLAPEF GWLPGDAAIF SETDSGWVND LVDRLLSESD
GEAASVFAEI LAIRAGVWDT EGIATVVSSP SPAPRQSDGS ADSASPLPWH DAASRSLADR
ARTAFARKPP PESPWLLRLP ALLLAAEFNA SRNDLNRDAC LGIAATLTFR ECRARDDYPG
EALILVRD
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