Gene Snas_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3088 
Symbol 
ID8884287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3258803 
End bp3259330 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511852 
Protein GI291300574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.224452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.355549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGTC GTATCGTCCT GACTGGAGGC CCCGGCGGCG GCAAGAGCAG CCTGATCGAG 
GCCCTGGCCC GCCAGGGCTA CCCGCACGCG CCCGAGGCCG GGCGCGCCAT CATCCGGGAC
CAGGTGGCGA TCGGCGGCCG GGCGTTGCCG TGGGCCGACG TCGAGTTGTT CGCCGAGCTG
ATGCTCGCCT TCGATCTGCG TTCCCACGGC GAGGCCGACG GGACGACGTT CTTCGATCGC
GGGATCGTCG ACACCGTCGG GTATCTGCGA CTGGAGGGGC GACCGGTGCC CGAGCATCTG
CTGACGGCGG CCCGGGCGTT CGGGTACGAC GCGGTGTTCG TGGCTCCGTA CTGGCCGGAG
ATCTACACAC AGGACGCCGA GCGCAAGCAG TCGCCTGAAG TCGCGAAGGC GACCTGCGAG
GCGGTCGTGG CCGCCTACCG GGAGTTCGGC TACTCCCCCG TGGAGCTGCC GCTGGTCGAC
GTGGAGCAGC GCCGGGATTT CGTCCTGGGG CGGCTGGCGG CGCGGTAG
 
Protein sequence
MPRRIVLTGG PGGGKSSLIE ALARQGYPHA PEAGRAIIRD QVAIGGRALP WADVELFAEL 
MLAFDLRSHG EADGTTFFDR GIVDTVGYLR LEGRPVPEHL LTAARAFGYD AVFVAPYWPE
IYTQDAERKQ SPEVAKATCE AVVAAYREFG YSPVELPLVD VEQRRDFVLG RLAAR