| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3082 |
|---|
| Symbol | |
|---|
| ID | 8884281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 3252919 |
|---|
| End bp | 3253872 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein |
|---|
| Protein accession | YP_003511846 |
|---|
| Protein GI | 291300568 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0139168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.376131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATTC ACGTCGTCAG CGCGCACCCC AACTTCACCC TCGAGGCCGA ATTGCGGGTG
CTGGTCGAGC GCAACCCGCA CTGGCGGTTC ACGATCGGCG ACGAGCCTCC GGCCGACGCG
GGCTACCAGG TGCTGATCGC GTCGCGGCCC ACCCGGGAGT TGCTCAGCGC CAGCCCGCGG
CTGACGACGG TGCAGCTGCC GTTCTCCGGG GTACCCGCCG TCACCCGTGA GGTGATGGCG
GACTTTCCGC ACCTGGAGTT GCGCAGCCTG CACCACAACG CCGGGCCGAC GGCGGAACTG
GCGCTGGGCC TGGTGCTGGC CGCGGCCCGG GGCATCGTGC CCGCCGACAC CGGGATGCGG
AGCGGCGACT GGACCTCGCG GTTCGTACCG CCGCGTCCGA CCATGCTGCT GGACGGCCAC
GGCGCCACAG TGGTCGGATA TGGCGAGATC GGCCGACGTG TGGCCCGAGG TCTTGCCGCG
CTGGGGATGA GGGTGCGAGC GACCCGCGCG AGCGTCACGT CGGCGTATAC CGACGGTGAC
GTCGAGGTCC GGCCCGCCGA TGCGCTTACG GAGCTGCTGC CCGATTCGCG GGTGCTGGTG
CTGACCGTCC CGGCGAGCCC GGCCACGACC GGGCTGATCG GCGAGGCGGA GCTGGCGCTG
CTGCCGGTGC CCGCGACGCT GGTCAACGTC TCCCGCGCCA CCGTCGTCGA CGAGAAGGCG
CTGTACGAGA AGCTGCGCGG CGGCGACCTG GCGGCGGGGC TGGACGTGTG GTGGGACGAG
GCCATCGAGC CCGACGCCGT GCACGGGGTG CCGGCCTCGG CGTATCCGTT CCACGAGCTG
CCCAACGTCG TGCTCAGCCC GCACCGGGGC GGGGCGTTCA GCCTGCCCGA GTCGGCGGTG
CTGCGGGCCG CGCACCTGGA AAAGGCGCTG GCGGAAATAG CGTCCGGGAA ATAA
|
|---|
| Protein sequence | MWIHVVSAHP NFTLEAELRV LVERNPHWRF TIGDEPPADA GYQVLIASRP TRELLSASPR
LTTVQLPFSG VPAVTREVMA DFPHLELRSL HHNAGPTAEL ALGLVLAAAR GIVPADTGMR
SGDWTSRFVP PRPTMLLDGH GATVVGYGEI GRRVARGLAA LGMRVRATRA SVTSAYTDGD
VEVRPADALT ELLPDSRVLV LTVPASPATT GLIGEAELAL LPVPATLVNV SRATVVDEKA
LYEKLRGGDL AAGLDVWWDE AIEPDAVHGV PASAYPFHEL PNVVLSPHRG GAFSLPESAV
LRAAHLEKAL AEIASGK
|
|---|
| |