Gene Snas_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3076 
Symbol 
ID8884275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3246552 
End bp3247679 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511840 
Protein GI291300562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.951684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.702563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTCA AGCAGTTGCG CGACGCCGAC GTCGCCAGCC TCGAAAAACT CGTCGAGCCG 
TGGAGCAAGG CCACCGGCAA ACTCGAAACC GGCTCCGACA CGGCGACCAA CCACGTCGGC
AACCGCATCC GTTCGGGCGC CTGGACCGGC CAAGCCGCCC AGACCGCCAC CACCCGCGTC
GGCTTCCTCG AAGCCCAAAC CGAAGCCGGA CAAACCGAGG GCGAAGCCAT CCACGGCATC
CTCAAACAAG CGGTCACGGC CTTCAACGGC AGCAAGAAAC GCCTCAACGA CATCATCGCC
GACGTCAAGG ACTACGACAA ACTCAACCTC GACGACAGCG GTCACGTCTC AGTGGACAAA
CCCGACTGGA AGGACATGCT GGGCGGCGGC GGCCTGTTCG GCACCCACTA CATCCAACTG
CGCGTCATCG CCTCCCGCTT CAACGACGAC ATCAAGGACA CCCTCGCCGA CGCCCGCCAA
CTCGACGGCC TAGTAGCCAC GGCCCTCCGA GCGGCGGCCA ACCTCGACGA ACCCAAGAAC
CTCGACTTCA ACCCCAACGC CAAGACCGAC GGCACCATCA CACTCCCCGA CAACGGCAAG
GTCGACTGGC CCGACACCTT CCTGTCGGGC GCTGGCGACT GGTACCTCAA ACTCGGCTCC
ATCATGTCCG CCGAACCCTT CATCGACGGC ACCCCGGCCG AACAGTCCGC GGCCATCGGC
GACTTCGTCA AGACCGAAGT GGAACGCGCT GGCGGCGAAT GCAAGATCGT CAACGGCATG
ATGGCCTGCG TGGGCGCCCC CGACTACATG TACGAACGCG GGGGCACCAC CTTCGGCGAC
ACCTTCGTCA GCAGGCACAA AACCTGGTCC GACCTCGAAA ACGACCCCAA CCAAAACCTC
AACGACCTGA TGAACCACGA GAAACACCAC CGCGACGAAC AATGGCGCAA ACACGGCGTC
AGCTTCGGCC GCAAGTACAT CGAGGAGGAG TTCCACGCCT GGCGGCTGGA CTACACCAAC
CGCTACGAAG CCGACGCCGA ACAACACGGG GGCCACACCG GCTACCCGGT CAAACCACCC
CCGACCCCCA ACCCCAGGCC CGGCCCCGCC CCCACACCCC CGAACTGA
 
Protein sequence
MDFKQLRDAD VASLEKLVEP WSKATGKLET GSDTATNHVG NRIRSGAWTG QAAQTATTRV 
GFLEAQTEAG QTEGEAIHGI LKQAVTAFNG SKKRLNDIIA DVKDYDKLNL DDSGHVSVDK
PDWKDMLGGG GLFGTHYIQL RVIASRFNDD IKDTLADARQ LDGLVATALR AAANLDEPKN
LDFNPNAKTD GTITLPDNGK VDWPDTFLSG AGDWYLKLGS IMSAEPFIDG TPAEQSAAIG
DFVKTEVERA GGECKIVNGM MACVGAPDYM YERGGTTFGD TFVSRHKTWS DLENDPNQNL
NDLMNHEKHH RDEQWRKHGV SFGRKYIEEE FHAWRLDYTN RYEADAEQHG GHTGYPVKPP
PTPNPRPGPA PTPPN