Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3072 |
Symbol | |
ID | 8884271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3241127 |
End bp | 3242293 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | amidohydrolase |
Protein accession | YP_003511836 |
Protein GI | 291300558 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0120887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.513246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGT CTTCGTTCGC GTTGCGCGGC GGGATCGTGA TTCCCATTGA CGGCGACCGG ATCGACGACG GGGTCGTCGT GGTGCGGGGC GGCCGGATCG AGGCCGTCGG TGACGCGAAC ACCCCGGTTC CCGGGGACGT GCGGGTCGTC GACGTGGCCG GGAAGTGGAT CGTGCCGGGG CTCATCGACG CCCACGTGCA CCTGGGTGTC CACGAGGAGG GTGAGGGCTG GGCGGGCCAG GACACCAACG AGATGACAGA CCCGGTGTGT TCGCAAGTGC GGGTCGTGGA CGCCATCAAC CCGGCCGAGC AGGGTTTCAG CGACGCGATC GCGGCGGGCG TGCTGGCCGT CAACGTCAAT CCGGGTTCGG GCAACCCGAT CGGCGGGCAG ACCGCGGCCA TCAAGTGCGT CGGACGCACC GTTGAGGAGA TGGCGCTGCG GGCGCCCAGT GGCATCAAGT CGGCGCTCGG TGAGAACCCC AAGCGGGTGT ACGGCGAGCA GAAGAAGACG CCCAGCACCC GGCTGGGCAC CGCCGCCACG ATCCGCGGCG CCATGGTGGA CGCGCAGAAC TACCGGGCGA AGCTGGCCGC CGACTCCGAC GCGCCGGTGG ACCGGGATCT GAAATCGGAG GCGCTGGCGC TGGTGCTGGA GCGGGAGATC CCGTGGCGGC AGCACTGCCA CCGTGCCGAC GACATCGCCA CCGCCATGCG CATCGCCGAG GAGTTCGGGT ACAAGCTGGT GCTCGACCAC GGCACCGAGG CGCACCTGCT GGCCGACATC ATCGCGGCCA AGGACATTCC CGTGATCATC GGTCCGCTGA TGGTCTCGCG GGTGAAGGTG GAGGTGCGCA ACCGGTCGGT GGCCAACCCG GGCAAGCTGG ACGCCGCCGG GGTCACCATC GCGATCACCA CCGACCACCC GGTGGTGCCG ATCGCGCATC TGATCACCCA GGTGACGTTG GCGGTGCGCG ACGGTCTCGA CCGCGACGCC GCGCTGCGGG CGGTGACGAT CAACCCGGCC CGCATCATGG GCGTCGACGA TCGGATCGGT TCGCTGACGC CCGGCAAGGA CGCCGACCTG TGCTTGTGGT CGGGAGATCC GCTGGACGTC TACAGCCGGG TCGAGACCGC CTTTGTGGAC GGCGTCGAGG TGTACCGGCA CGAGTGA
|
Protein sequence | MSESSFALRG GIVIPIDGDR IDDGVVVVRG GRIEAVGDAN TPVPGDVRVV DVAGKWIVPG LIDAHVHLGV HEEGEGWAGQ DTNEMTDPVC SQVRVVDAIN PAEQGFSDAI AAGVLAVNVN PGSGNPIGGQ TAAIKCVGRT VEEMALRAPS GIKSALGENP KRVYGEQKKT PSTRLGTAAT IRGAMVDAQN YRAKLAADSD APVDRDLKSE ALALVLEREI PWRQHCHRAD DIATAMRIAE EFGYKLVLDH GTEAHLLADI IAAKDIPVII GPLMVSRVKV EVRNRSVANP GKLDAAGVTI AITTDHPVVP IAHLITQVTL AVRDGLDRDA ALRAVTINPA RIMGVDDRIG SLTPGKDADL CLWSGDPLDV YSRVETAFVD GVEVYRHE
|
| |