Gene Snas_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3071 
Symbol 
ID8884270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3240160 
End bp3241056 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003511835 
Protein GI291300557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.16451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG TCACTGGGAG CGTGTCGCTT GGCATATTTG TCGGTCCGTG GTACTTAGCT 
GAAACCATGG CTGACAATAC GATTCTGGTC ATCGGCAGCA CCGGCAAGAT CGGGCGCCAT
GTCGCCGAAC GGCTACGCGA GCGCGACGTC ACCGTCAAGG CGGCGTCCCG GTCCGGCCCG
GTCCACTTCG ACTGGCACGA CGAGGCCACC TGGCCGGGTG CCCTCGACGG CGCGCAGGGC
GCCTATCTCG TCGACTCCCA GGACGCCGAT CGCGTCCCGC TGCTGCGCCG CTTCAGCGCG
CTGGCCGCCC ACCGGGGCCT GCGCCGTCTG GTGTTCCTGT CGGCCCGCGA GGCCGAGAGC
GTCAACCCCA CCCTGGAGGA GAAGGAGGCG GCCATCAAGG ACGCCGGTAC CGAGTGGACG
ATCCTGCGTC CGGTCTGGTT CAACCAGAAC TTCTCCGAGG TCGCGGCGTT CCGGGAACCA
TTGCGGGCGG GGGAGTTGCG CCTGCCCGCC GGGGACGGTC CGCAACCCTT CATCGACGCC
GAGGACATCG CCGAGGTCGC CGCCGCCGCG CTGACCACCG ACGGCCACCA CGGCCGCACC
TACGACCTGT CCGGGCCGGA GGCGATCAGC TTCGGCGAGG CCGTCGCCCA CATCGCCAAG
GCCACCGGCC GCGACCTGCG CTACCGCCCG GTCAGCGCTG AAGATTACGT CGCCGACCCG
GCCGCGTTCG GCGCCCAGCC CGGCCAGGCC GAGGGGTACG CGCTGCTCAT GGCCGCGATC
GCCGAGGGCA AGACGTCGCA CCTGTCCGAC GGCGTGAAGC AGGCGCTGGG CCGCGATCCG
CGCGGCTTCG CCGAATACGC CGTCAAGACC GCCGCCACCG GCGTGTGGGA CGCCTGA
 
Protein sequence
MTHVTGSVSL GIFVGPWYLA ETMADNTILV IGSTGKIGRH VAERLRERDV TVKAASRSGP 
VHFDWHDEAT WPGALDGAQG AYLVDSQDAD RVPLLRRFSA LAAHRGLRRL VFLSAREAES
VNPTLEEKEA AIKDAGTEWT ILRPVWFNQN FSEVAAFREP LRAGELRLPA GDGPQPFIDA
EDIAEVAAAA LTTDGHHGRT YDLSGPEAIS FGEAVAHIAK ATGRDLRYRP VSAEDYVADP
AAFGAQPGQA EGYALLMAAI AEGKTSHLSD GVKQALGRDP RGFAEYAVKT AATGVWDA