Gene Snas_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3065 
Symbol 
ID8884264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3233871 
End bp3235076 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID 
Productacetylornithine and succinylornithine aminotransferase 
Protein accessionYP_003511829 
Protein GI291300551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.110355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.664029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA CACAGGACCT CAGGGAGCGG TTCACCGACG CCCTGATGCC CAACTACGGG 
ACGCCCGGCG TCGCGCTGTC GCACGGCGAC GGCACCACCG TCTACGACGT CGACGGCAAC
GAGTACCTCG ACTTCATCGG CGGCATCGCC GTGTCGGCAT TGGGACACGC CCACCCGGCA
CTGGTCACCG CCGTTTCCGA ACAGGTCGCC CGGATCGCCC ACACCTCCAA CCTGTTCCTG
CACGAACCCG AGGTCGCGCT CGCCGAGAAA CTGCTGTCGC TCGTGGGCGA ACCCGGCAAG
GTGTTCTTCT CCAACAGCGG CACCGAAGCC AACGAATGCG CCCTCAAACT CGCCATCGCC
AACGGCAAAG CCAAGGGCCG CACCTACTTC GTCGCCAGCA CCGACGGCTT CCACGGCCGC
AGCATGGGGG CGCTGGCCCT GACCGGCAAG GCCGCGATCC GGGAACCCTT CGCGCCCTTC
GGTATCGACG TGCGGTTCGT GCCCTACGGT GACGCCGCCG CCCTCAACGA CGCCGTGGAC
GAATCCTGCG CCGCGGTGAT CCTGGAACCC ACCCAGGGCG AGACCGGCGT CGTGCCGCCG
CCCGAGGGCT ACTTCGCCGC TGTGCGCGAC ATCTGCGACA CCACCGGGGC GCTGTTCATC
GCCGACGAGA TCCAGTCCGG CATCGGTCGC ACCGGAACCT GGTTCGCCTA CCAGCAGACC
GGCATCGTCC CCGACGTCGT CACCCTCGCC AAGGGACTCG GCGGGGGACT GCCCATCGGC
GCCTGTATCG GCATCGGCGC CTACGGCGAC GTCTTCGCCA AGGGCGACCA CGGTTCCACC
TTCGGCGGCA ACCCGGTCGC CACCGCCGCG GCGCTGGCGG TACTGGACAC CATCGAGTCC
GACAAACTCA CCGAAGCCGC CGCCGACAAG GGAAAGCGGC TCGCCGAGGG CATCCGGGCA
CTGAACCACC CGCTGGTCGC CGAGGTCCGG GGCAAGGGCC TGTGGCTGGG CGTCGAGCTG
ACCGCCGAGG TTGCCGCCGA CGTCGACTCG ACGCTGCGCT CGTCCGGCGT CCTCGCCAAC
CCGGTGCGCC CCAACGTCAT CCGGCTCGCG CCGCCGCTGG TCGTCACCGA CGCCCAGATC
GACGCGTTCC TGAGCGTGCT TCCCCGCGCG CTCGACGCGG CCTACCCGCC GGGAGGACGA
CCGTGA
 
Protein sequence
MTATQDLRER FTDALMPNYG TPGVALSHGD GTTVYDVDGN EYLDFIGGIA VSALGHAHPA 
LVTAVSEQVA RIAHTSNLFL HEPEVALAEK LLSLVGEPGK VFFSNSGTEA NECALKLAIA
NGKAKGRTYF VASTDGFHGR SMGALALTGK AAIREPFAPF GIDVRFVPYG DAAALNDAVD
ESCAAVILEP TQGETGVVPP PEGYFAAVRD ICDTTGALFI ADEIQSGIGR TGTWFAYQQT
GIVPDVVTLA KGLGGGLPIG ACIGIGAYGD VFAKGDHGST FGGNPVATAA ALAVLDTIES
DKLTEAAADK GKRLAEGIRA LNHPLVAEVR GKGLWLGVEL TAEVAADVDS TLRSSGVLAN
PVRPNVIRLA PPLVVTDAQI DAFLSVLPRA LDAAYPPGGR P