Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3047 |
Symbol | |
ID | 8884246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3213321 |
End bp | 3213830 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | RNA polymerase sigma-24 subunit, ECF subfamily |
Protein accession | YP_003511811 |
Protein GI | 291300533 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0780559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCCG AAGCGGAAGC CGAATACCGC GAGTTCGTGT CCGCACGTCT GGATCAGTTG GGAAGGTTCG CCTTCCTACT GTGCCGGGAC TGGCACCGCG CCGAGGACGC AGTGCAGAAA GGTCTCGTGA AGCTCTACCT CCACTGGGAC AAGACCACGA TCAAGTCTCC GGACGCCTAC GTGCGGCAGG TCATCGTCAA CGTCGTACGC GAGGAAGCCC GGCGGCACTG GTTCAAGCGG GAACGGTCCA GCGACAGGCT TCCCGAACGC CACCACCCCG ACCCGGGCGA GGCGGGCAGC GAACGGCTGA CCATGTTGGA CGCACTGTCT CGATTGCCCA AGCGGCAACG GATCGCTGTC GTCCTCCGTA TCTGGGAGGA CCTGTCGGTT GAACAGACCG CCGAGATCAT GGCCTGTTCG CCCGGCACCG TCAAGAGCCA GACCGCGCGA GGCTTGCAGA CACTGCGCGG GCTGCTGAGT GAAACGATCC CCGAGGAAGT CACGACATGA
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Protein sequence | MKPEAEAEYR EFVSARLDQL GRFAFLLCRD WHRAEDAVQK GLVKLYLHWD KTTIKSPDAY VRQVIVNVVR EEARRHWFKR ERSSDRLPER HHPDPGEAGS ERLTMLDALS RLPKRQRIAV VLRIWEDLSV EQTAEIMACS PGTVKSQTAR GLQTLRGLLS ETIPEEVTT
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