Gene Snas_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3023 
Symbol 
ID8884222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3187945 
End bp3188778 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content71% 
IMG OID 
ProductBeta-lactamase class A-like protein 
Protein accessionYP_003511787 
Protein GI291300509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0538064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.499976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TGACACGGTT TGACGCGCGG TTCGGCGCGC TGGACGGCGA GTTCTCGGTG 
TGGTGTGGCA GGCCGGGGAA GCCGCCGGTG TACACCCTTG AGCCCGATCG GCTGCACTAC
CCGGCCAGCA CGATGAAGAT CGGTGTGATG GCGGCGGCCT ACCGGCTCGC CGACGCCGGG
AAGCTGGACC TCGACGAGCA CATCGCGGTG CACAACGAGT TCACCTCCGC GGTGGGCGGC
GGCTTCGCGA TGGATCCGGA GTACGACTCG GACGCGGAGG TGTGGCAGTA CCAGGGCGCG
AGCGCCTCGG TGCGGTGGCT GATCCGGCGG ATGATCGTGC GTTCGTCCAA TCTGGCCACC
AACCTGGTGC TGGACAAGGT GGGTTACGCG GCGGCGCAGG AGGCGTACCG GGCCGCCGGG
GCCACCCGCA GCATCACCCG GCGCGGCATC GAGGACTACG CCGCCCGCGA CGCCGGGGTG
GACAACGAGA TCACCGCGGC CGACCTGGCC GCGCAGCTGT CGGCGATCCA GCTGGGGCGG
CTGGCCTCAC CGGCGTCGTG CGCCGAGATG CTGGATGTGC TGGCGGCGCA GGAGTTCCAG
GTGGACTTCG CGCGCGGTCT GCCGGAGGGG ACCCGGATCG CGTTGAAGAA CGGCTGGATC
GACGGCGTCC GGCATTCGGC GGCACTGGTG TACCCCGACG ACACCGAGCC GTACGCGCTG
GTCGCGTGTG CGACCAGCCC GCTGGCCACC TCGCAGGAGG GTGACGACGA GGTGTGCCGG
ATCTTCGCCG AGCTCTCGGC GGCGGTGTGG CAGCGCCGGG CGGACCTGGG CTGA
 
Protein sequence
MDALTRFDAR FGALDGEFSV WCGRPGKPPV YTLEPDRLHY PASTMKIGVM AAAYRLADAG 
KLDLDEHIAV HNEFTSAVGG GFAMDPEYDS DAEVWQYQGA SASVRWLIRR MIVRSSNLAT
NLVLDKVGYA AAQEAYRAAG ATRSITRRGI EDYAARDAGV DNEITAADLA AQLSAIQLGR
LASPASCAEM LDVLAAQEFQ VDFARGLPEG TRIALKNGWI DGVRHSAALV YPDDTEPYAL
VACATSPLAT SQEGDDEVCR IFAELSAAVW QRRADLG