Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3023 |
Symbol | |
ID | 8884222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3187945 |
End bp | 3188778 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Beta-lactamase class A-like protein |
Protein accession | YP_003511787 |
Protein GI | 291300509 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0538064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.499976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCAT TGACACGGTT TGACGCGCGG TTCGGCGCGC TGGACGGCGA GTTCTCGGTG TGGTGTGGCA GGCCGGGGAA GCCGCCGGTG TACACCCTTG AGCCCGATCG GCTGCACTAC CCGGCCAGCA CGATGAAGAT CGGTGTGATG GCGGCGGCCT ACCGGCTCGC CGACGCCGGG AAGCTGGACC TCGACGAGCA CATCGCGGTG CACAACGAGT TCACCTCCGC GGTGGGCGGC GGCTTCGCGA TGGATCCGGA GTACGACTCG GACGCGGAGG TGTGGCAGTA CCAGGGCGCG AGCGCCTCGG TGCGGTGGCT GATCCGGCGG ATGATCGTGC GTTCGTCCAA TCTGGCCACC AACCTGGTGC TGGACAAGGT GGGTTACGCG GCGGCGCAGG AGGCGTACCG GGCCGCCGGG GCCACCCGCA GCATCACCCG GCGCGGCATC GAGGACTACG CCGCCCGCGA CGCCGGGGTG GACAACGAGA TCACCGCGGC CGACCTGGCC GCGCAGCTGT CGGCGATCCA GCTGGGGCGG CTGGCCTCAC CGGCGTCGTG CGCCGAGATG CTGGATGTGC TGGCGGCGCA GGAGTTCCAG GTGGACTTCG CGCGCGGTCT GCCGGAGGGG ACCCGGATCG CGTTGAAGAA CGGCTGGATC GACGGCGTCC GGCATTCGGC GGCACTGGTG TACCCCGACG ACACCGAGCC GTACGCGCTG GTCGCGTGTG CGACCAGCCC GCTGGCCACC TCGCAGGAGG GTGACGACGA GGTGTGCCGG ATCTTCGCCG AGCTCTCGGC GGCGGTGTGG CAGCGCCGGG CGGACCTGGG CTGA
|
Protein sequence | MDALTRFDAR FGALDGEFSV WCGRPGKPPV YTLEPDRLHY PASTMKIGVM AAAYRLADAG KLDLDEHIAV HNEFTSAVGG GFAMDPEYDS DAEVWQYQGA SASVRWLIRR MIVRSSNLAT NLVLDKVGYA AAQEAYRAAG ATRSITRRGI EDYAARDAGV DNEITAADLA AQLSAIQLGR LASPASCAEM LDVLAAQEFQ VDFARGLPEG TRIALKNGWI DGVRHSAALV YPDDTEPYAL VACATSPLAT SQEGDDEVCR IFAELSAAVW QRRADLG
|
| |