Gene Snas_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3021 
Symbol 
ID8884220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3186001 
End bp3186615 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511785 
Protein GI291300507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00856166 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.256259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT CCGCGACAAC AACATCCGTC AAGGGCGGTA CCCGCTGGCG CAAGTTCGCG 
ATCCTGCTCG TACCGTCGCT GCTGCTGGGA ATCGGCATGC TGGTCATGAC GGCGAACGGA
TCGATGGCCG CCAGCTTCGC CGTGTCGGCG ACGTCGTTCA AGATCACCGC CGACAAGATG
GAGGGTGAGG GCTTCGCCCA ATATGGATCC ATCACCCTAG ACGGCAAGGA CGGCGAACAC
CCGGTGGCCC CGGCCGGGAT CGAGGTCGCC AAGATCTACA ACCTGTGTCA GTCGGCGGTC
TACGAGACCC CGCTGGGCAC CTACACCATC CGCATCTCCG CCGGGACCAA GGAACCCGTC
GAGGCCAACA ACCTCATCCT CGACACCGAC GACCTGACCG GCGACGCCGT GTTCGAGAAC
ATCGAGATCG GCCGCGACGC CTCCACACTG GACCAGGTGA CGGGTCACCA GGGCGACAAG
GGTGCCTTCG GGCAGCAGTC CGACACCATC TCGATCACGA ACGTCAAGGG CCGCAACTGG
GCCGTCAACG CCGGAACCTT CAAACTCCAC AACCTCGACC TGTCCATCAA GGCCGGTAAG
GACGAGTGCT ACTGA
 
Protein sequence
MSTSATTTSV KGGTRWRKFA ILLVPSLLLG IGMLVMTANG SMAASFAVSA TSFKITADKM 
EGEGFAQYGS ITLDGKDGEH PVAPAGIEVA KIYNLCQSAV YETPLGTYTI RISAGTKEPV
EANNLILDTD DLTGDAVFEN IEIGRDASTL DQVTGHQGDK GAFGQQSDTI SITNVKGRNW
AVNAGTFKLH NLDLSIKAGK DECY