Gene Snas_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3003 
Symbol 
ID8884202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3170442 
End bp3170894 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content66% 
IMG OID 
ProductDoxX family protein 
Protein accessionYP_003511768 
Protein GI291300490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0015102 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTTCTC GAATTCAGCC GATTTCGCTA CTCCTGATGC GCGTGGTCAC CGGTGGCGTG 
TTCGTTATGC ACGGCTGGCA GAAGCTGTCC GACCAGGGAT TGCCCGCCAC CGTCGAAGGC
ATGAAAGGCA TGGGCGTACC GATGCCGCAA CTGGCGGCGT ACTTCTCGAC CTTCGTCGAA
GTGGTCGGCG GTGCCGCCCT CGTCCTCGGC GCACTGCTGC CACTGGCGGG CCTGCTGCTG
ACTGCGGACA TGGTGGGCGC CTTGATCTTC GTACACCTCG GCGAGGGGTT CTTCCTGCCC
GCCGGTTACG AATACGTCCT GGTGCTGGCG GCGGTGTCGC TGGGCATCGG TTTCTCCGGC
GGCGGAGCGC TCGCCGTCGA CAACCTCATA CCCGGCCTGC GCACCCGCAA GCCCAAGCCC
ACGCCGAGCG ACACAGCGGC CACGCCCGCG TGA
 
Protein sequence
MISRIQPISL LLMRVVTGGV FVMHGWQKLS DQGLPATVEG MKGMGVPMPQ LAAYFSTFVE 
VVGGAALVLG ALLPLAGLLL TADMVGALIF VHLGEGFFLP AGYEYVLVLA AVSLGIGFSG
GGALAVDNLI PGLRTRKPKP TPSDTAATPA