Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2997 |
Symbol | |
ID | 8884196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3164084 |
End bp | 3164992 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Aldose 1-epimerase |
Protein accession | YP_003511764 |
Protein GI | 291300486 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0040024 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTGA CGGGGGAACA GTTCCCGATC GCCGCCGGTG GCTACCGGGC GACGGTGACC GAAGCGGGCG CGGGACTGCG CGAACTGACC TTTCAGGACC AACCGCTGAT CCTGTCGCAC GGCGCCGACC AGACCGCCCC GGCCGCGTTC GGGCAGCTGC TGATCCCGTG GCCCAACCGC GTCGACCACG GCCGCTACAG CTTCGACGGC ACCGCCTACC AACTGGACAT CAACGAACCC GCATACGACT GCGCCATCCA CGGACTCGCC CGCTGGGCCA CCTGGGCCCC GGCCGAACAC GAGGCGGACC GGGTGCGGCT GACCCACCGG CTGCTGGGAA GCCCGGGTTA CCCGTTCCGG CTCGACCTCG ACGTCGAGTA CACACTGGAC GCGGCGCGCG GGCTGACCGT CCGGCTGACG GCGACCAACA GCGGCACCCG CCCGGCCCCC TACGCCCACG GGGCCCACCC GTACCTCACC GTCGGCCAGC CCATCGACAC CTGCGTGGTC CGCGTCCCCG CCGACGACCA CCTGCCCGTC GACGGCCGGA TGATCCCGTA CGGCCCGCCA CAGCCGGTCA AGGGAACCGA CTACGACCTG CGCGACGGAC GACTGCTGGG CGACCAGCGC ATTGACCTGG CGTTCACCGG CCTGACCCGC GGCGCCGACG GCCGCGCCTG GGTGCACCTG TCCGGCGAGA ACCGCACGAC CTCGTTCTGG CTCGACCGCA CCCAACCGTG GCTGGAGATC TACACCGCCG ACAATGTCCC GTCCACTCTG GCGCGTCAGG GGCTGGGCGT CGAACCCATG ACCTCGCCGC CCAACGCCTT CGCCACCGGT GACGACCTGG TGCGCCTGGA CCCCGGCGGC ACCATCACCG GTTGTTGGGG AATCGCCGCC ACCGCCTGA
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Protein sequence | MSLTGEQFPI AAGGYRATVT EAGAGLRELT FQDQPLILSH GADQTAPAAF GQLLIPWPNR VDHGRYSFDG TAYQLDINEP AYDCAIHGLA RWATWAPAEH EADRVRLTHR LLGSPGYPFR LDLDVEYTLD AARGLTVRLT ATNSGTRPAP YAHGAHPYLT VGQPIDTCVV RVPADDHLPV DGRMIPYGPP QPVKGTDYDL RDGRLLGDQR IDLAFTGLTR GADGRAWVHL SGENRTTSFW LDRTQPWLEI YTADNVPSTL ARQGLGVEPM TSPPNAFATG DDLVRLDPGG TITGCWGIAA TA
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