Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2982 |
Symbol | |
ID | 8884181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3150866 |
End bp | 3152587 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003511749 |
Protein GI | 291300471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.270832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0254721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGAA TAGCGGGATA CGCGCGCAGG CATATAGCGC TTGCCATGGT GGCGGCGCTG ACGGTCACGA TGGCCGGAGC CTGCACCGCC GACACCCCCA AACCCGAGAC GGTCGCCTCG AAACCCGGCG AGGGCGGCAC GGTGCGCGTC TTCACCCAGA CCCTGGAGAC CCTCGACCCG CAGCGCGTGT ACGTCATCAC CGGCCTGAAC GTGTCCACAC TCATCACCCG GACACTGACG ACGTTCACCG CCAAACCGGG GGAGAAGCCC AAGCTCGTCG GCGACCTGGC CACCGACACC GGCAAACCCA ACAAGGACAA CACCTCCTGG ACCTACACGC TGCGCGACGG CGTCAAATGG CAGGACGGCA CCGAGCTCAG CTGCGAGGAC GTGCGCTACG GCGTGCTGCG CAACTTCGAC GTGCGACGCA AGGACGCCAA GATCACCGGC GGCCCGAGCT ATCCCACCGA ATGGCTTGAC GTCCCCGAGG ACTACGAAGG ACCCAAGGGC GACAAGTCCG ACAAGGACCT CTCCGGGGTC ACCTGCGAGA ACAAGCGCAC CATCCGCTTC GACCTGAAGG AGCCGCAGGC CAACTTCCCG TCCGCGGTGA ACCTGCCCGC GTTCTCCCCG GTCCCGGAGC AGCACGACAC CTGGGCCGAC TACGGCGAGG AACCGGTGTC GACCGGACCG TACAAACTGT CCTCGTACAA GCCCTCCAAG GGCGACACGC CGGGACGCGC GGTCTTCGAA CGCAACCGGT TCTGGGACTC CGAGACCGAC AAGATCCGCG ATGCCAAGCC GGACAAGATC ATCCTCGAAC TCGGCAAGGA CCCCGAGGAG GTCGCGCAGC AGATCGTGTC CGACAACCCC GGCTACGACA ACGCCGTCCT GTACGACTCG GTGCCGAACA AGTTCGTCTC GCAGGTCGTC AACGACAAGC AGCTGAAGAA GCAGACGGTG TCGGGCTCCA CCAGCGGCGT CACCTACATG GCGATCAACA CCGAGACCGT GGAGGGCCGC GACTGTCGGC GGGCGTTGAT GTACGCGTTC AACAAGAGCA AGTACATGGA CGCCATCGGC GGCGACGTGT TCGGCGACTA CGCCACCACG ATGCTGCCGC CGTCGGATCC GGCGCACCGC GACCACGACG TCTACGGCCT GGACGGCGAC CCTGACGGCG ATCTCGACAA GGCCCGGGAA CTGCTCGAGG AGGCCAAGGG CTGTCCCGAA AGCCTCACCC TCGACGTGCA GGACACCGAA CGCGGTGAAC GCACCGGCGA CACGATTGCG GAGACCTTCG GGCGCCTGGG CATCACCGTC AAGGTCAACA AGATCGCCCC GAACAAGTAC TTCGACACGC TGTCCCAACC GGACAAGCTG CACGACCTGA CGATCGCCTC CTGGATCCCG GACTGGCCGG GCGGCTCGGG CGTGATCCCG GCGCTGTTCG ACGGCGACCT CATCAAGCCC GGCCTCAACA GCAACTACTC CAAACTGGAT GATCCCAAGA TCAACGAGCG GATCGACGAG GCCAGTATGG AGACCGACCG CAAGCGGTCG TACGAACTGT GGGCCGACCT GGACGAGCAG ATCCAGAAGG AGGCCGCGGT CGTCCCGATC GTGTACCCCA AGGCGCTGAA CCTGTGTGGC GTCGACGTAC GCGGCGGCGT GCTGAACCCG CAGTGGGGCG GCATCGACTT CGCCTCGCTG GGTGTCAAAT GA
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Protein sequence | MRGIAGYARR HIALAMVAAL TVTMAGACTA DTPKPETVAS KPGEGGTVRV FTQTLETLDP QRVYVITGLN VSTLITRTLT TFTAKPGEKP KLVGDLATDT GKPNKDNTSW TYTLRDGVKW QDGTELSCED VRYGVLRNFD VRRKDAKITG GPSYPTEWLD VPEDYEGPKG DKSDKDLSGV TCENKRTIRF DLKEPQANFP SAVNLPAFSP VPEQHDTWAD YGEEPVSTGP YKLSSYKPSK GDTPGRAVFE RNRFWDSETD KIRDAKPDKI ILELGKDPEE VAQQIVSDNP GYDNAVLYDS VPNKFVSQVV NDKQLKKQTV SGSTSGVTYM AINTETVEGR DCRRALMYAF NKSKYMDAIG GDVFGDYATT MLPPSDPAHR DHDVYGLDGD PDGDLDKARE LLEEAKGCPE SLTLDVQDTE RGERTGDTIA ETFGRLGITV KVNKIAPNKY FDTLSQPDKL HDLTIASWIP DWPGGSGVIP ALFDGDLIKP GLNSNYSKLD DPKINERIDE ASMETDRKRS YELWADLDEQ IQKEAAVVPI VYPKALNLCG VDVRGGVLNP QWGGIDFASL GVK
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